myRT

myRT report for GCA_003573295.1_ASM357329v1

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Seq: QWTU01000022.1 Shigella dysenteriae strain DMB SH20207 MOD1-SH20207_22_length_38600_cov_24.453703, whole genome shotgun sequence (38600 bp)
Overview 1 RT 1: 67-2822 bp Neighborhood of RT #1 [67, 2824] RVT-GII GIIM YhhI YhhI PRK01271 Feature: gene Location: 67-1566 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 520-1177 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 520-1 1 77 bp Feature: domain Description: GIIM Note: maturase Location: 1261-1471 bp Feature: domain Description: GIIM Note: maturase Location: 1 261 -1 471 bp Feature: gene Location: 1773-2564 bp Feature: domain Description: YhhI Location: 1776-2139 bp Feature: domain Description: YhhI Location: 1 776-21 39 bp Feature: domain Description: YhhI Location: 2196-2547 bp Feature: domain Description: YhhI Location: 21 96-2547 bp Feature: gene Location: 2597-2824 bp Feature: domain Description: PRK01271 Location: 2600-2822 bp Feature: domain Description: PRK01 271 Location: 2600-2822 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), YhhI (COG5433), PRK01271 (tautomerase PptA)

Seq: QWTU01000240.1 Shigella dysenteriae strain DMB SH20207 MOD1-SH20207_240_length_3145_cov_39.364401, whole genome shotgun sequence (3145 bp)
Overview 1 RT 1: 1287-2972 bp Neighborhood of RT #1 [1287, 3142] RVT-GII GIIM RVT-GII Feature: gene Location: 1287-1529 bp Feature: gene Location: 1701-1856 bp Feature: gene Location: 1882-2409 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1888-2032 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1888-2 032 bp Feature: domain Description: GIIM Note: maturase Location: 2116-2332 bp Feature: domain Description: GIIM Note: maturase Location: 2 116-2 332 bp Feature: gene Location: 2419-2691 bp Feature: gene Location: 2708-3142 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2711-2972 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 711-2 972 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: QWTU01000286.1 Shigella dysenteriae strain DMB SH20207 MOD1-SH20207_286_length_1689_cov_47.023868, whole genome shotgun sequence (1689 bp)
Overview 1 RT 1: 107-1553 bp Neighborhood of RT #1 [107, 1687] DDE_Tnp_IS66 RVT-GII Feature: gene Location: 107-238 bp Feature: domain Description: DDE_Tnp_IS66 Location: 119-212 bp Feature: domain Description: DDE_Tnp_IS66 Location: 119-212 bp Feature: gene Location: 800-1687 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 902-1553 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 902-1553 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66 (pfam03050), RVT-GII

Seq: QWTU01000293.1 Shigella dysenteriae strain DMB SH20207 MOD1-SH20207_293_length_1584_cov_33.826684, whole genome shotgun sequence (1584 bp)
Overview 1 RT 1: 227-1581 bp Neighborhood of RT #1 [227, 1583] DDE_Tnp_1 RVT-GII RVT-GII Feature: gene Location: 227-1009 bp Feature: domain Description: DDE_Tnp_1 Location: 233-941 bp Feature: domain Description: DDE_Tnp_1 Location: 233-94 1 bp Feature: gene Location: 1035-1238 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1143-1233 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 114 3-1233 bp Feature: gene Location: 1299-1583 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1308-1581 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1308-1581 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII

Seq: QWTU01000332.1 Shigella dysenteriae strain DMB SH20207 MOD1-SH20207_332_length_1026_cov_133.964985, whole genome shotgun sequence (1026 bp)
Overview 1 RT 1: 48-954 bp Neighborhood of RT #1 [48, 971] RVT-GII Tra5 Feature: gene Location: 48-737 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 348-735 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 348-735 bp Feature: gene Location: 750-971 bp Feature: domain Description: Tra5 Location: 762-954 bp Feature: domain Description: Tra5 Location: 762-95 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Tra5 (COG2801)