myRT

myRT report for GCA_003573335.1_ASM357333v1

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Seq: QWTC01000254.1 Shigella flexneri strain DMB SH20100 MOD1-SH20100_254_length_5899_cov_13.082820, whole genome shotgun sequence (5899 bp)
Overview 1 RT 1: 121-2707 bp Neighborhood of RT #1 [121, 2721] DDE_Tnp_IS66 RVT-GII GIIM DDE_Tnp_IS66_C COG3547 Feature: gene Location: 121-252 bp Feature: domain Description: DDE_Tnp_IS66 Location: 133-226 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 33-226 bp Feature: gene Location: 730-1947 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 916-1570 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91 6-1 570 bp Feature: domain Description: GIIM Note: maturase Location: 1648-1870 bp Feature: domain Description: GIIM Note: maturase Location: 1 648-1 870 bp Feature: gene Location: 2063-2209 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 2075-2186 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 2075-21 86 bp Feature: gene Location: 2236-2721 bp Feature: domain Description: COG3547 Location: 2254-2707 bp Feature: domain Description: COG3547 Location: 2254-2707 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), COG3547 (Transposase ), RVT-GII, GIIM (pfam08388)

Seq: QWTC01000678.1 Shigella flexneri strain DMB SH20100 MOD1-SH20100_678_length_908_cov_3.862837, whole genome shotgun sequence (908 bp)
Overview 1 RT 1: 3-798 bp Neighborhood of RT #1 [3, 905] RVT-GII Feature: gene Location: 3-905 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12-798 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 -798 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII