myRT

myRT report for GCA_003574485.1_ASM357448v1

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Seq: QLIT01000015.1 Fastidiosibacteraceae bacterium SYSU SYW-5 contig015, whole genome shotgun sequence (1838 bp)
Overview 1 RT 1: 1-1507 bp Neighborhood of RT #1 [1, 1704] RVT-UG4 DDE_Tnp_1 Feature: gene Location: 1-192 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 13-169 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1 3-1 69 bp Feature: gene Location: 382-1704 bp Feature: domain Description: DDE_Tnp_1 Location: 973-1507 bp Feature: domain Description: DDE_Tnp_1 Location: 973-1 507 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4, DDE_Tnp_1 (pfam01609)

Seq: QLIT01000040.1 Fastidiosibacteraceae bacterium SYSU SYW-5 contig040, whole genome shotgun sequence (656 bp)
Overview 1 RT 1: 111-279 bp Neighborhood of RT #1 [111, 653] RVT-GII Feature: gene Location: 111-653 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 117-279 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 117-2 79 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: QLIT01000041.1 Fastidiosibacteraceae bacterium SYSU SYW-5 contig041, whole genome shotgun sequence (653 bp)
Overview 1 RT 1: 117-276 bp Neighborhood of RT #1 [117, 650] RVT-GII Feature: gene Location: 117-650 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 120-276 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 120-276 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: QLIT01000052.1 Fastidiosibacteraceae bacterium SYSU SYW-5 contig052, whole genome shotgun sequence (6025 bp)
Overview 1 RT 1: 4259-6003 bp Neighborhood of RT #1 [4259, 6023] IglC Acetyltransf_1 RVT-CRISPR-like Feature: gene Location: 4259-4933 bp Feature: domain Description: IglC Location: 4280-4841 bp Feature: domain Description: IglC Location: 4 280-4 84 1 bp Feature: gene Location: 4972-5472 bp Feature: domain Description: Acetyltransf_1 Location: 5152-5416 bp Feature: domain Description: Acetyltransf_1 Location: 5152-54 16 bp Feature: gene Location: 5496-6023 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 5703-6003 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 5703-6003 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IglC (pfam11550), Acetyltransf_1 (pfam00583), RVT-CRISPR

Seq: QLIT01000097.1 Fastidiosibacteraceae bacterium SYSU SYW-5 contig097, whole genome shotgun sequence (713 bp)
Overview 1 RT 1: 3-483 bp Neighborhood of RT #1 [3, 710] RVT-GII Feature: gene Location: 3-710 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-483 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-483 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: QLIT01000144.1 Fastidiosibacteraceae bacterium SYSU SYW-5 contig144, whole genome shotgun sequence (1397 bp)
Overview 1 RT 1: 3-1366 bp Neighborhood of RT #1 [3, 1395] RVT-GII Feature: gene Location: 3-155 bp Feature: gene Location: 475-1395 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 757-1366 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 757-136 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: QLIT01000162.1 Fastidiosibacteraceae bacterium SYSU SYW-5 contig162, whole genome shotgun sequence (536 bp)
Overview 1 RT 1: 3-534 bp Neighborhood of RT #1 [3, 533] RVT-GII Feature: gene Location: 3-533 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 147-534 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 147 -534 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: QLIT01000167.1 Fastidiosibacteraceae bacterium SYSU SYW-5 contig167, whole genome shotgun sequence (7201 bp)
Overview 1 RT 1: 3151-6555 bp Neighborhood of RT #1 [3151, 6555] Tra_M arc_metj RVT_N RVT-GII Feature: gene Location: 3151-3510 bp Feature: domain Description: Tra_M Location: 3166-3469 bp Feature: domain Description: Tra_M Location: 3166-3469 bp Feature: gene Location: 3519-3854 bp Feature: domain Description: arc_metj Location: 3528-3630 bp Feature: domain Description: arc_metj Location: 3528 -3630 bp Feature: gene Location: 5058-6110 bp Feature: domain Description: RVT_N Location: 5115-5355 bp Feature: domain Description: RVT_N Location: 5115-5355 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5403-6024 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5403-6024 bp Feature: gene Location: 6385-6555 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra_M (pfam05261), arc_metj (LOAD_arc_metj), RVT_N (pfam13655), RVT-GII

Seq: QLIT01000273.1 Fastidiosibacteraceae bacterium SYSU SYW-5 contig273, whole genome shotgun sequence (3675 bp)
Overview 1 RT 1: 1515-3496 bp Neighborhood of RT #1 [1515, 3672] OmpR RVT-UG4 Feature: gene Location: 1515-1841 bp Feature: domain Description: OmpR Location: 1530-1797 bp Feature: domain Description: OmpR Location: 1530-179 7 bp Feature: gene Location: 2128-2916 bp Feature: gene Location: 3217-3672 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3229-3496 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 3229 -349 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT OmpR (COG0745), RVT-UG4

Seq: QLIT01000355.1 Fastidiosibacteraceae bacterium SYSU SYW-5 contig355, whole genome shotgun sequence (614 bp)
Overview 1 RT 1: 1-289 bp Neighborhood of RT #1 [1, 288] RVT-GII Feature: gene Location: 1-288 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-289 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-289 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII