myRT

myRT report for GCA_003575225.1_ASM357522v1

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Seq: QXDJ01000001.1 Clostridium chromiireducens strain C1 Scaffold1, whole genome shotgun sequence (1324273 bp)
Overview 1 RT 1: 208444-216752 bp Neighborhood of RT #1 [208444, 216752] Lrp COG3963 RVT-Retrons RVT-Retrons Feature: gene Location: 208444-208899 bp Feature: domain Description: Lrp Location: 208447-208867 bp Feature: domain Description: Lrp Location: 208447-208867 bp Feature: gene Location: 209302-209883 bp Feature: domain Description: COG3963 Location: 209335-209878 bp Feature: domain Description: COG3963 Location: 209335-209878 bp Feature: gene Location: 210366-211946 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 211002-211176 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 21 1 002-21 1 1 76 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 211254-211698 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 21 1 254-21 1 698 bp Feature: gene Location: 211943-213763 bp Feature: gene Location: 213753-216752 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Lrp (COG1522), COG3963 (Phospholipid N-methyltransferase ), RVT-Retrons

Seq: QXDJ01000002.1 Clostridium chromiireducens strain C1 Scaffold2, whole genome shotgun sequence (1314267 bp)
Overview 1 RT 1: 1041280-1050761 bp Neighborhood of RT #1 [1041280, 1050772] PRK08295 MurNAc-LAA COG5263 AE_Prim_S_like RVT-UG10 IscU GGGtGRT Feature: gene Location: 1041280-1041555 bp Feature: domain Description: PRK08295 Location: 1041298-1041544 bp Feature: domain Description: PRK082 95 Location: 10412 98-1041544 bp Feature: gene Location: 1041759-1042658 bp Feature: domain Description: MurNAc-LAA Location: 1041771-1042275 bp Feature: domain Description: MurNAc-LAA Location: 1041771-1042 2 75 bp Feature: domain Description: COG5263 Location: 1042338-1042650 bp Feature: domain Description: COG52 63 Location: 1042 338-1042 650 bp Feature: gene Location: 1042902-1048136 bp Feature: domain Description: AE_Prim_S_like Location: 1043007-1043310 bp Feature: domain Description: AE_Prim_S_like Location: 1043007-1043310 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 1044243-1044879 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 10442 43-1044879 bp Feature: gene Location: 1049053-1049745 bp Feature: domain Description: IscU Location: 1049158-1049566 bp Feature: domain Description: IscU Location: 1049158-1049566 bp Feature: gene Location: 1049771-1050772 bp Feature: domain Description: GGGtGRT Location: 1049783-1050761 bp Feature: domain Description: GGGtGRT Location: 1049783-1050761 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK08295 (RNA polymerase sporulation sigma factor SigH), MurNAc-LAA (cl02713), COG5263 (Glucan-binding domain (YG repeat) ), AE_Prim_S_like (cl01287), RVT-UG10, IscU (COG0822), GGGtGRT (pfam14057)

Seq: QXDJ01000003.1 Clostridium chromiireducens strain C1 Scaffold3, whole genome shotgun sequence (936672 bp)
Overview 1 RT 1: 587132-591309 bp Neighborhood of RT #1 [587132, 591842] MurNAc-LAA PG_binding_1 RVT-DGRs Avd_like FGE-sulfatase Feature: gene Location: 587132-587809 bp Feature: gene Location: 587888-588751 bp Feature: domain Description: MurNAc-LAA Location: 587903-588404 bp Feature: domain Description: MurNAc-LAA Location: 587903 -588404 bp Feature: domain Description: PG_binding_1 Location: 588635-588743 bp Feature: domain Description: PG_binding_1 Location: 58863 5-588743 bp Feature: gene Location: 588810-589928 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 589050-589704 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 589050-589704 bp Feature: gene Location: 590206-590547 bp Feature: domain Description: Avd_like Location: 590230-590536 bp Feature: domain Description: Avd_like Location: 59023 0-59053 6 bp Feature: gene Location: 590679-591842 bp Feature: domain Description: FGE-sulfatase Location: 590904-591309 bp Feature: domain Description: FGE-sulfatase Location: 590904-5913 09 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MurNAc-LAA (cl02713), PG_binding_1 (pfam01471), RVT-DGRs, Avd_like (cd16376), FGE-sulfatase (pfam03781)