myRT

myRT report for GCA_003577005.1_ASM357700v1

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Seq: QEUW01000487.1 Chloroflexi bacterium isolate CFX5 J3_scaffold_10729, whole genome shotgun sequence (8029 bp)
Overview 1 RT 1: 4538-7891 bp Neighborhood of RT #1 [4538, 7956] Methyltransf_25 kdpA RVT-GII Intron_maturas2 HNHc Feature: gene Location: 4538-5152 bp Feature: domain Description: Methyltransf_25 Location: 4625-4793 bp Feature: domain Description: Methyltransf_25 Location: 4625-4793 bp Feature: gene Location: 5519-5812 bp Feature: domain Description: kdpA Location: 5534-5708 bp Feature: domain Description: kdpA Location: 5534-5708 bp Feature: gene Location: 6148-7956 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6409-7204 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6409-7204 bp Feature: domain Description: Intron_maturas2 Location: 7312-7543 bp Feature: domain Description: Intron_maturas2 Location: 731 2-7543 bp Feature: domain Description: HNHc Note: nucleases Location: 7735-7891 bp Feature: domain Description: HNHc Note: nucleases Location: 7735-7891 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Methyltransf_25 (pfam13649), kdpA (TIGR00680), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: QEUW01000668.1 Chloroflexi bacterium isolate CFX5 J3_scaffold_21727, whole genome shotgun sequence (2844 bp)
Overview 1 RT 1: 254-2782 bp Neighborhood of RT #1 [254, 2841] RVT-GII GIIM HNHc Feature: gene Location: 254-508 bp Feature: gene Location: 770-1195 bp Feature: gene Location: 1261-2841 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1414-2098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1414-2 098 bp Feature: domain Description: GIIM Note: maturase Location: 2164-2395 bp Feature: domain Description: GIIM Note: maturase Location: 2 164-2 395 bp Feature: domain Description: HNHc Note: nucleases Location: 2632-2782 bp Feature: domain Description: HNHc Note: nucleases Location: 2 632 -2 782 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: QEUW01000784.1 Chloroflexi bacterium isolate CFX5 J3_scaffold_35247, whole genome shotgun sequence (1903 bp)
Overview 1 RT 1: 3-1900 bp Neighborhood of RT #1 [3, 1900] Cas1_I-II-III RVT-CRISPR Feature: gene Location: 3-341 bp Feature: domain Description: Cas1_I-II-III Location: 15-339 bp Feature: domain Description: Cas1_I-II-III Location: 15-3 3 9 bp Feature: gene Location: 355-1248 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 583-1186 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 583 -1186 bp Feature: gene Location: 1223-1900 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas1_I-II-III (cl00656), RVT-CRISPR

Seq: QEUW01000800.1 Chloroflexi bacterium isolate CFX5 J3_scaffold_37446, whole genome shotgun sequence (1813 bp)
Overview 1 RT 1: 25-1524 bp Neighborhood of RT #1 [25, 1646] RVT-GII IS5 Feature: gene Location: 25-609 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 238-589 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 238-589 bp Feature: gene Location: 975-1646 bp Feature: domain Description: IS5 Location: 1161-1524 bp Feature: domain Description: IS5 Location: 1161-1524 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, IS5 (COG3039)

Seq: QEUW01000815.1 Chloroflexi bacterium isolate CFX5 J3_scaffold_41060, whole genome shotgun sequence (1687 bp)
Overview 1 RT 1: 1-1687 bp Neighborhood of RT #1 [1, 1686] YfmG RVT-DGRs Feature: gene Location: 1-723 bp Feature: domain Description: YfmG Location: 67-697 bp Feature: domain Description: YfmG Location: 67-697 bp Feature: gene Location: 940-1686 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1150-1687 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 115 0-1687 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YfmG (COG1262), RVT-DGRs