myRT

myRT report for GCA_003579805.1_ASM357980v1

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Seq: QWDP01000007.1 (342422 bp)
Overview 1 RT 1: 90317-96939 bp Neighborhood of RT #1 [90317, 96941] RVT-UG8 PRK15246 Feature: gene Location: 90317-90481 bp Feature: gene Location: 90657-91418 bp Feature: gene Location: 93345-95363 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 93918-94371 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 9391 8-94371 bp Feature: gene Location: 95902-96135 bp Feature: gene Location: 96183-96941 bp Feature: domain Description: PRK15246 Location: 96243-96939 bp Feature: domain Description: PRK1 5246 Location: 96243-96939 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG8, PRK15246 (fimbrial assembly chaperone)

Seq: QWDP01000013.1 (104064 bp)
Overview 1 RT 1: 81196-85031 bp Neighborhood of RT #1 [81196, 85031] HTH_XRE RVT_N RVT-GII YkfC HNHc PRK09738 Feature: gene Location: 81196-81483 bp Feature: gene Location: 81577-81846 bp Feature: domain Description: HTH_XRE Location: 81592-81694 bp Feature: domain Description: HTH_XRE Location: 81592 -81694 bp Feature: gene Location: 82092-83765 bp Feature: domain Description: RVT_N Location: 82152-82395 bp Feature: domain Description: RVT_N Location: 82 152 -82 395 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 82440-83082 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 82 440-83082 bp Feature: domain Description: YkfC Location: 83211-83382 bp Feature: domain Description: YkfC Location: 832 11-83382 bp Feature: domain Description: HNHc Note: nucleases Location: 83580-83742 bp Feature: domain Description: HNHc Note: nucleases Location: 83580-83742 bp Feature: gene Location: 84322-84501 bp Feature: domain Description: PRK09738 Location: 84325-84478 bp Feature: domain Description: PRK09738 Location: 8432 5-84478 bp Feature: gene Location: 84705-85031 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507), PRK09738 (small toxic polypeptide; Provisional)