myRT

myRT report for GCA_003583475.1_ASM358347v1

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Seq: QXHI01000035.1 (33822 bp)
Overview 1 RT 1: 6641-11001 bp Neighborhood of RT #1 [6641, 11003] D PRK09678 RVT-UG11 SmpB PRK10724 Feature: gene Location: 6641-7741 bp Feature: domain Description: D Location: 6647-7730 bp Feature: domain Description: D Location: 6647-7730 bp Feature: gene Location: 7832-8050 bp Feature: domain Description: PRK09678 Location: 7835-8033 bp Feature: domain Description: PRK09678 Location: 7835-8033 bp Feature: gene Location: 8454-9227 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 8589-9042 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 8589-9042 bp Feature: gene Location: 9913-10395 bp Feature: domain Description: SmpB Location: 9943-10390 bp Feature: domain Description: SmpB Location: 9943-1 0390 bp Feature: gene Location: 10527-11003 bp Feature: domain Description: PRK10724 Location: 10533-11001 bp Feature: domain Description: PRK1 0724 Location: 1 0533-1 1 001 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT D (PHA02561), PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-UG11, SmpB (pfam01668), PRK10724 (type II toxin-antitoxin system RatA family toxin)

Seq: QXHI01000013.1 (50628 bp)
Overview 1 RT 1: 7239-11189 bp Neighborhood of RT #1 [7239, 11245] DUF2442 PRK09010 RVT_N RVT-GII GIIM HNHc DUF3577 Feature: gene Location: 7239-7487 bp Feature: domain Description: DUF2442 Location: 7254-7452 bp Feature: domain Description: DUF2 442 Location: 72 54-7452 bp Feature: gene Location: 7778-8254 bp Feature: domain Description: PRK09010 Location: 7781-8207 bp Feature: domain Description: PRK09010 Location: 7781-82 07 bp Feature: gene Location: 8361-10058 bp Feature: domain Description: RVT_N Location: 8424-8667 bp Feature: domain Description: RVT_N Location: 842 4-8667 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8712-9357 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8712 -9357 bp Feature: domain Description: GIIM Note: maturase Location: 9408-9642 bp Feature: domain Description: GIIM Note: maturase Location: 9408-9642 bp Feature: domain Description: HNHc Note: nucleases Location: 9852-10014 bp Feature: domain Description: HNHc Note: nucleases Location: 9852 -10014 bp Feature: gene Location: 10381-10518 bp Feature: gene Location: 10775-11245 bp Feature: domain Description: DUF3577 Location: 10805-11189 bp Feature: domain Description: DUF3577 Location: 10805-11189 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2442 (pfam10387), PRK09010 (single-stranded DNA-binding protein; Provisional), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), DUF3577 (pfam12101)