myRT

myRT report for GCA_003584875.1_ASM358487v1

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Seq: QVQD01000214.1 (4443 bp)
Overview 1 RT 1: 2-3260 bp Neighborhood of RT #1 [2, 4402] RVT-UNC Feature: gene Location: 2-4402 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2666-3260 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2666-3260 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG11/RVT-G2L/RVT-UG17/RVT-CRISPR(RVT-UNC)

Seq: QVQD01000016.1 (3874 bp)
Overview 1 RT 1: 1-2248 bp Neighborhood of RT #1 [1, 3690] RVT-UNC Feature: gene Location: 1-3690 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1858-2248 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1858-2 2 48 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG11/RVT-UG17/RVT-G2L4/RVT-G2L(RVT-UNC)

Seq: QVQD01000015.1 (3776 bp)
Overview 1 RT 1: 2-3699 bp Neighborhood of RT #1 [2, 3773] retropepsin_like RVT-UNC RNase_HI_RT_Ty3 Integrase_H2C2 rve CD_POL_like Feature: gene Location: 2-187 bp Feature: gene Location: 204-3773 bp Feature: domain Description: retropepsin_like Location: 408-651 bp Feature: domain Description: retropepsin_like Location: 408-651 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1506-1674 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1506-1674 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 1971-2319 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 1971-23 19 bp Feature: domain Description: Integrase_H2C2 Location: 2430-2583 bp Feature: domain Description: Integrase_H2C2 Location: 243 0-2583 bp Feature: domain Description: rve Location: 2637-2970 bp Feature: domain Description: rve Location: 263 7-2970 bp Feature: domain Description: CD_POL_like Location: 3546-3699 bp Feature: domain Description: CD_POL_like Location: 3 546-3 699 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT retropepsin_like (cd00303), RVT-G2L4/RVT-DGRs/RVT-UG26/RVT-UG4(RVT-UNC), RNase_HI_RT_Ty3 (cd09274), Integrase_H2C2 (pfam17921), rve (pfam00665), CD_POL_like (cd18979)

Seq: QVQD01000104.1 (1930 bp)
Overview 1 RT 1: 501-1731 bp Neighborhood of RT #1 [501, 1835] RVT-GII GIIM Feature: gene Location: 501-1835 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 792-1449 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 792-14 4 9 bp Feature: domain Description: GIIM Note: maturase Location: 1521-1731 bp Feature: domain Description: GIIM Note: maturase Location: 1521-1731 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)