myRT

myRT report for GCA_003585335.1_ASM358533v1

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Seq: NOJH01000009.1 (158666 bp)
Overview 1 RT 1: 48973-52541 bp Neighborhood of RT #1 [48973, 52541] DUF2188 RVT_N RVT-GII GIIM HNHc Feature: gene Location: 48973-49533 bp Feature: gene Location: 49860-50081 bp Feature: domain Description: DUF2188 Location: 49875-50052 bp Feature: domain Description: DUF21 88 Location: 49875-50052 bp Feature: gene Location: 50267-51967 bp Feature: domain Description: RVT_N Location: 50339-50582 bp Feature: domain Description: RVT_N Location: 50339-50582 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50627-51272 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 50627-51 272 bp Feature: domain Description: GIIM Note: maturase Location: 51323-51557 bp Feature: domain Description: GIIM Note: maturase Location: 51 323-51 557 bp Feature: domain Description: HNHc Note: nucleases Location: 51773-51935 bp Feature: domain Description: HNHc Note: nucleases Location: 51 773-51 935 bp Feature: gene Location: 52127-52297 bp Feature: gene Location: 52380-52541 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2188 (pfam09954), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: NOJH01000014.1 (79674 bp)
Overview 1 RT 1: 71514-75284 bp Neighborhood of RT #1 [71514, 75313] RVT-UG4 PRK09776 PAS_9 PleD Feature: gene Location: 71514-72221 bp Feature: gene Location: 72115-72369 bp Feature: gene Location: 72416-73090 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 72734-72989 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 72 734-72 989 bp Feature: gene Location: 73145-73687 bp Feature: gene Location: 74042-75313 bp Feature: domain Description: PRK09776 Location: 74150-74456 bp Feature: domain Description: PRK09776 Location: 74150-74456 bp Feature: domain Description: PAS_9 Location: 74474-74780 bp Feature: domain Description: PAS_9 Location: 74474-74780 bp Feature: domain Description: PleD Location: 74780-75284 bp Feature: domain Description: PleD Location: 74780-752 84 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4, PRK09776 (putative diguanylate cyclase; Provisional), PAS_9 (pfam13426), PleD (COG3706)

Seq: NOJH01000002.1 (346465 bp)
Overview 1 RT 1: 226082-233422 bp Neighborhood of RT #1 [226082, 233442] modA PRK00784 RVT-Retrons AAA_15 AAA_15 Hypoth_Ymh Feature: gene Location: 226082-226840 bp Feature: domain Description: modA Location: 226109-226826 bp Feature: domain Description: modA Location: 226109-226826 bp Feature: gene Location: 226852-228396 bp Feature: domain Description: PRK00784 Location: 226948-228382 bp Feature: domain Description: PRK00784 Location: 226948-2283 82 bp Feature: gene Location: 229101-230201 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 229242-229800 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 229242-229800 bp Feature: gene Location: 230377-232494 bp Feature: domain Description: AAA_15 Location: 230380-230797 bp Feature: domain Description: AAA_15 Location: 23 03 80-23 0797 bp Feature: domain Description: AAA_15 Location: 230932-231361 bp Feature: domain Description: AAA_15 Location: 23 093 2-23 13 61 bp Feature: gene Location: 232642-233442 bp Feature: domain Description: Hypoth_Ymh Location: 233062-233422 bp Feature: domain Description: Hypoth_Ymh Location: 23 3 062-23 3 422 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT modA (TIGR01256), PRK00784 (cobyric acid synthase), RVT-Retrons, AAA_15 (pfam13175), Hypoth_Ymh (pfam09509)