myRT

myRT report for GCA_003590855.1_ASM359085v1

Download annotations/find similar RTs

Seq: QYUP01000061.1 (32359 bp)
Overview 1 RT 1: 5744-10393 bp Neighborhood of RT #1 [5744, 10398] KOG0814 PHA02517 RVT-GII GIIM PHA02517 InsE Feature: gene Location: 5744-6493 bp Feature: domain Description: KOG0814 Location: 5747-6422 bp Feature: domain Description: KOG081 4 Location: 5747-6422 bp Feature: gene Location: 6944-7393 bp Feature: domain Description: PHA02517 Location: 6947-7355 bp Feature: domain Description: PHA0251 7 Location: 6947-7355 bp Feature: gene Location: 7516-9048 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7789-8527 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7789-8527 bp Feature: domain Description: GIIM Note: maturase Location: 8602-8800 bp Feature: domain Description: GIIM Note: maturase Location: 8602-8800 bp Feature: gene Location: 9667-9915 bp Feature: domain Description: PHA02517 Location: 9676-9880 bp Feature: domain Description: PHA0251 7 Location: 9676-9880 bp Feature: gene Location: 10108-10398 bp Feature: domain Description: InsE Location: 10111-10393 bp Feature: domain Description: InsE Location: 1 01 1 1 -1 0393 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG0814 (KOG0814, Glyoxylase ), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963)

Seq: QYUP01000114.1 (13153 bp)
Overview 1 RT 1: 3-3994 bp Neighborhood of RT #1 [3, 3994] PHA02517 InsE RVT-GII GIIM IS5 Feature: gene Location: 3-242 bp Feature: domain Description: PHA02517 Location: 6-240 bp Feature: domain Description: PHA02 517 Location: 6-2 40 bp Feature: gene Location: 673-969 bp Feature: domain Description: InsE Location: 676-961 bp Feature: domain Description: InsE Location: 676-961 bp Feature: gene Location: 1124-1681 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1133-1208 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1133-12 08 bp Feature: domain Description: GIIM Note: maturase Location: 1259-1493 bp Feature: domain Description: GIIM Note: maturase Location: 12 59-1493 bp Feature: gene Location: 2404-3246 bp Feature: domain Description: IS5 Location: 2590-3172 bp Feature: domain Description: IS5 Location: 2 590-3172 bp Feature: gene Location: 3593-3994 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963), RVT-GII, GIIM (pfam08388), IS5 (COG3039)

Seq: QYUP01000073.1 (37689 bp)
Overview 1 RT 1: 23104-29571 bp Neighborhood of RT #1 [23104, 29579] MhpC dcd RVT-GII GIIM LdcC DHFR_1 Feature: gene Location: 23104-23901 bp Feature: domain Description: MhpC Location: 23116-23872 bp Feature: domain Description: MhpC Location: 23 116-23 872 bp Feature: gene Location: 23997-24563 bp Feature: domain Description: dcd Location: 24006-24558 bp Feature: domain Description: dcd Location: 24006-24558 bp Feature: gene Location: 25178-26611 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25565-26189 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25565-26189 bp Feature: domain Description: GIIM Note: maturase Location: 26234-26444 bp Feature: domain Description: GIIM Note: maturase Location: 2623 4-26444 bp Feature: gene Location: 26661-28913 bp Feature: domain Description: LdcC Location: 27090-28908 bp Feature: domain Description: LdcC Location: 27090-28908 bp Feature: gene Location: 29094-29579 bp Feature: domain Description: DHFR_1 Location: 29106-29571 bp Feature: domain Description: DHFR_1 Location: 29106-29571 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MhpC (COG0596), dcd (PRK00416), RVT-GII, GIIM (pfam08388), LdcC (COG1982), DHFR_1 (pfam00186)

Seq: QYUP01000150.1 (56925 bp)
Overview 1 RT 1: 19671-27401 bp Neighborhood of RT #1 [19671, 27401] GIIM RVT-GII GIIM RVT-GII Smc Smc Feature: gene Location: 19671-20177 bp Feature: gene Location: 20245-20577 bp Feature: domain Description: GIIM Note: maturase Location: 20317-20425 bp Feature: domain Description: GIIM Note: maturase Location: 20317-204 25 bp Feature: gene Location: 20588-21772 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20732-21389 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20732-21389 bp Feature: domain Description: GIIM Note: maturase Location: 21467-21695 bp Feature: domain Description: GIIM Note: maturase Location: 214 67-21695 bp Feature: gene Location: 22236-23465 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22569-23184 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22569-23184 bp Feature: gene Location: 23913-26744 bp Feature: domain Description: Smc Location: 23925-24900 bp Feature: domain Description: Smc Location: 23925-24 900 bp Feature: domain Description: Smc Location: 25572-26607 bp Feature: domain Description: Smc Location: 25572-26607 bp Feature: gene Location: 26748-27401 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GIIM (pfam08388), RVT-GII, Smc (COG1196)

Seq: QYUP01000149.1 (99052 bp)
Overview 1 RT 1: 57981-61529 bp Neighborhood of RT #1 [57981, 61529] PHA02517 group_II_RT_mat RVT-GII PHA02517 Feature: gene Location: 57981-58430 bp Feature: domain Description: PHA02517 Location: 57984-58392 bp Feature: domain Description: PHA025 17 Location: 5 7984-5 8392 bp Feature: gene Location: 58553-59128 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 58559-58871 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 5 85 5 9-5 8871 bp Feature: gene Location: 59215-60084 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59488-59974 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5 9488-5 9974 bp Feature: gene Location: 60703-61143 bp Feature: domain Description: PHA02517 Location: 60799-61108 bp Feature: domain Description: PHA025 17 Location: 60799-61108 bp Feature: gene Location: 61203-61529 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), group_II_RT_mat (TIGR04416), RVT-GII

Seq: QYUP01000111.1 (95285 bp)
Overview 1 RT 1: 89583-94986 bp Neighborhood of RT #1 [89583, 94991] HVD RVT-GII GIIM LivM LivH Feature: gene Location: 89583-90749 bp Feature: domain Description: HVD Location: 89610-90747 bp Feature: domain Description: HVD Location: 896 10-90747 bp Feature: gene Location: 90773-91183 bp Feature: gene Location: 91279-92646 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 91612-92227 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 916 12-92227 bp Feature: domain Description: GIIM Note: maturase Location: 92281-92494 bp Feature: domain Description: GIIM Note: maturase Location: 92281-92494 bp Feature: gene Location: 93107-94093 bp Feature: domain Description: LivM Location: 93125-94052 bp Feature: domain Description: LivM Location: 93125-94052 bp Feature: gene Location: 94107-94991 bp Feature: domain Description: LivH Location: 94131-94986 bp Feature: domain Description: LivH Location: 94131-94986 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HVD (cd08193), RVT-GII, GIIM (pfam08388), LivM (COG4177), LivH (COG0559)

Seq: QYUP01000090.1 (10894 bp)
Overview 1 RT 1: 3-6201 bp Neighborhood of RT #1 [3, 6215] Met_dep_hydrolase_A asnASE_II RVT-GII GIIM ATM1 YciA Feature: gene Location: 3-710 bp Feature: domain Description: Met_dep_hydrolase_A Location: 72-660 bp Feature: domain Description: Met_dep_hydrolase_A Location: 7 2-660 bp Feature: gene Location: 728-1804 bp Feature: domain Description: asnASE_II Location: 791-1802 bp Feature: domain Description: asnASE_II Location: 7 91-1802 bp Feature: gene Location: 1871-2827 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1874-2405 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 187 4-2405 bp Feature: domain Description: GIIM Note: maturase Location: 2450-2660 bp Feature: domain Description: GIIM Note: maturase Location: 2450-2660 bp Feature: gene Location: 3874-5712 bp Feature: domain Description: ATM1 Location: 4186-5674 bp Feature: domain Description: ATM1 Location: 4186-567 4 bp Feature: gene Location: 5775-6215 bp Feature: domain Description: YciA Location: 5835-6201 bp Feature: domain Description: YciA Location: 5835-6201 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Met_dep_hydrolase_A (cd01299), asnASE_II (TIGR00520), RVT-GII, GIIM (pfam08388), ATM1 (COG5265), YciA (COG1607)

Seq: QYUP01000081.1 (16877 bp)
Overview 1 RT 1: 2250-7116 bp Neighborhood of RT #1 [2250, 7163] PRK07630 CoAse RVT-GII GIIM rplS trmD Feature: gene Location: 2250-3209 bp Feature: domain Description: PRK07630 Location: 2253-3207 bp Feature: domain Description: PRK07630 Location: 2253-3207 bp Feature: gene Location: 3294-3965 bp Feature: domain Description: CoAse Location: 3477-3945 bp Feature: domain Description: CoAse Location: 3477-3945 bp Feature: gene Location: 4068-5435 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4401-5016 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4401-5016 bp Feature: domain Description: GIIM Note: maturase Location: 5070-5283 bp Feature: domain Description: GIIM Note: maturase Location: 5070-528 3 bp Feature: gene Location: 5891-6274 bp Feature: domain Description: rplS Location: 5894-6239 bp Feature: domain Description: rplS Location: 58 94-6239 bp Feature: gene Location: 6372-7163 bp Feature: domain Description: trmD Location: 6375-7116 bp Feature: domain Description: trmD Location: 6375-7116 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK07630 (CobD/CbiB family protein; Provisional), CoAse (cd03426), RVT-GII, GIIM (pfam08388), rplS (PRK05338), trmD (TIGR00088)

Seq: QYUP01000086.1 (17345 bp)
Overview 1 RT 1: 7397-13878 bp Neighborhood of RT #1 [7397, 13916] PRK10666 GshA RVT-GII GIIM PRK05246 ManX Feature: gene Location: 7397-8944 bp Feature: domain Description: PRK10666 Location: 7604-8939 bp Feature: domain Description: PRK10666 Location: 7604-89 39 bp Feature: gene Location: 9106-10407 bp Feature: domain Description: GshA Location: 9157-10375 bp Feature: domain Description: GshA Location: 9 157-10375 bp Feature: gene Location: 10988-12421 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11375-11999 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11375-119 9 9 bp Feature: domain Description: GIIM Note: maturase Location: 12044-12254 bp Feature: domain Description: GIIM Note: maturase Location: 12044-12254 bp Feature: gene Location: 12560-13507 bp Feature: domain Description: PRK05246 Location: 12563-13502 bp Feature: domain Description: PRK05246 Location: 12563-13502 bp Feature: gene Location: 13509-13916 bp Feature: domain Description: ManX Location: 13512-13878 bp Feature: domain Description: ManX Location: 13512-13878 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10666 (ammonium transporter AmtB), GshA (pfam08886), RVT-GII, GIIM (pfam08388), PRK05246 (glutathione synthetase; Provisional), ManX (COG2893)