myRT

myRT report for GCA_003591535.1_ASM359153v1

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Seq: NSKY01000018.1 (120362 bp)
Overview 1 RT 1: 16364-22816 bp Neighborhood of RT #1 [16364, 22816] Nuc_deoxyrib_tr RVT-Retrons AAA_15 Feature: gene Location: 16364-16615 bp Feature: gene Location: 16645-17481 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 17134-17305 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 1 71 34-1 7305 bp Feature: gene Location: 18137-19237 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 18317-18851 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 831 7-1 8851 bp Feature: gene Location: 19352-21598 bp Feature: domain Description: AAA_15 Location: 19355-20363 bp Feature: domain Description: AAA_1 5 Location: 1 9355-20363 bp Feature: gene Location: 22511-22816 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Nuc_deoxyrib_tr (pfam05014), RVT-Retrons, AAA_15 (pfam13175)

Seq: NSKY01000041.1 (14802 bp)
Overview 1 RT 1: 9297-14322 bp Neighborhood of RT #1 [9297, 14327] umuC PRK10276 RVT-GII ArdC Feature: gene Location: 9297-10568 bp Feature: domain Description: umuC Location: 9300-10560 bp Feature: domain Description: umuC Location: 9300-10560 bp Feature: gene Location: 10568-11380 bp Feature: domain Description: PRK10276 Location: 11000-11363 bp Feature: domain Description: PRK102 76 Location: 11000-11363 bp Feature: gene Location: 11405-12892 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11810-12500 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11810-12 500 bp Feature: gene Location: 12961-13230 bp Feature: gene Location: 13362-14327 bp Feature: domain Description: ArdC Location: 13488-14322 bp Feature: domain Description: ArdC Location: 13488-1432 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, ArdC (COG4227)

Seq: NSKY01000006.1 (295141 bp)
Overview 1 RT 1: 266492-269566 bp Neighborhood of RT #1 [266492, 269571] PRK09678 RVT-UG11 SmpB PRK10724 Feature: gene Location: 266492-266710 bp Feature: domain Description: PRK09678 Location: 266495-266693 bp Feature: domain Description: PRK09678 Location: 266495-266693 bp Feature: gene Location: 266957-267145 bp Feature: gene Location: 267588-267887 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 267591-267702 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 267591-267702 bp Feature: gene Location: 268502-268984 bp Feature: domain Description: SmpB Location: 268532-268976 bp Feature: domain Description: SmpB Location: 26853 2-268976 bp Feature: gene Location: 269134-269571 bp Feature: domain Description: PRK10724 Location: 269137-269566 bp Feature: domain Description: PRK10724 Location: 26913 7-269566 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-UG11, SmpB (pfam01668), PRK10724 (type II toxin-antitoxin system RatA family toxin)