myRT

myRT report for GCA_003594535.1_ASM359453v1

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Seq: NOXR01000003.1 (263936 bp)
Overview 1 RT 1: 520-7298 bp 2 RT 2: 164351-169953 bp Neighborhood of RT #1 [520, 7519] Cas2_I_II_III RVT-CRISPR Cas_Cas1 TIGR03986 RAMPs RAMPs Neighborhood of RT #2 [164351, 169958] DUF2188 RVT_N RVT-GII GIIM HNHc groEL Feature: gene Location: 520-798 bp Feature: domain Description: Cas2_I_II_III Location: 532-727 bp Feature: domain Description: Cas2_I_II_III Location: 532-727 bp Feature: gene Location: 802-3618 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1891-2500 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1 891 -2500 bp Feature: domain Description: Cas_Cas1 Location: 2677-3493 bp Feature: domain Description: Cas_Cas1 Location: 2677-3493 bp Feature: gene Location: 3627-6020 bp Feature: domain Description: TIGR03986 Location: 3648-5613 bp Feature: domain Description: TIGR03986 Location: 3648-561 3 bp Feature: gene Location: 6020-7519 bp Feature: domain Description: RAMPs Location: 6059-6539 bp Feature: domain Description: RAMPs Location: 6059-6539 bp Feature: domain Description: RAMPs Location: 6761-7298 bp Feature: domain Description: RAMPs Location: 6761 -7298 bp Feature: gene Location: 164351-164911 bp Feature: gene Location: 165236-165463 bp Feature: domain Description: DUF2188 Location: 165251-165428 bp Feature: domain Description: DUF21 88 Location: 1 65251 -1 65428 bp Feature: gene Location: 165545-167230 bp Feature: domain Description: RVT_N Location: 165617-165860 bp Feature: domain Description: RVT_N Location: 1 6561 7-1 65860 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 165905-166550 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 65905-1 66550 bp Feature: domain Description: GIIM Note: maturase Location: 166601-166835 bp Feature: domain Description: GIIM Note: maturase Location: 1 66601 -1 66835 bp Feature: domain Description: HNHc Note: nucleases Location: 167048-167204 bp Feature: domain Description: HNHc Note: nucleases Location: 1 67048-1 67204 bp Feature: gene Location: 167390-167662 bp Feature: gene Location: 168324-169958 bp Feature: domain Description: groEL Location: 168330-169953 bp Feature: domain Description: groEL Location: 1 68330-1 69953 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas2_I_II_III (cl11442), RVT-CRISPR, Cas_Cas1 (pfam01867), TIGR03986 (CRISPR-associated protein), RAMPs (pfam03787), DUF2188 (pfam09954), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)
groEL (PRK12852)