myRT

myRT report for GCA_003598065.1_ASM359806v1

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Seq: QZKR01000055.1 (36306 bp)
Overview 1 RT 1: 326-2951 bp Neighborhood of RT #1 [326, 3052] RVT-GII PRK07883 Feature: gene Location: 326-1648 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 629-1328 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 629-1 328 bp Feature: gene Location: 1515-1862 bp Feature: gene Location: 2405-3052 bp Feature: domain Description: PRK07883 Location: 2429-2951 bp Feature: domain Description: PRK07883 Location: 2429-2951 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK07883 (DEDD exonuclease domain-containing protein)

Seq: QZKR01000127.1 (28482 bp)
Overview 1 RT 1: 16558-20907 bp Neighborhood of RT #1 [16558, 20942] RVT-GII GIIM DUF4760 rSAM_FibroRumin Feature: gene Location: 16558-16794 bp Feature: gene Location: 17234-17509 bp Feature: gene Location: 17522-18904 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17858-18476 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17858-18476 bp Feature: domain Description: GIIM Note: maturase Location: 18524-18752 bp Feature: domain Description: GIIM Note: maturase Location: 1852 4-18752 bp Feature: gene Location: 18974-19531 bp Feature: domain Description: DUF4760 Location: 19274-19499 bp Feature: domain Description: DUF4760 Location: 192 74-19499 bp Feature: gene Location: 19557-20942 bp Feature: domain Description: rSAM_FibroRumin Location: 19605-20907 bp Feature: domain Description: rSAM_FibroRumin Location: 19605-2 0907 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DUF4760 (pfam15956), rSAM_FibroRumin (TIGR04136)

Seq: QZKR01000157.1 (57947 bp)
Overview 1 RT 1: 52248-57945 bp Neighborhood of RT #1 [52248, 57945] Cas2_I_II_III RVT-CRISPR Cas1_I-II-III Feature: gene Location: 52248-52418 bp Feature: gene Location: 54014-54298 bp Feature: domain Description: Cas2_I_II_III Location: 54035-54260 bp Feature: domain Description: Cas2_I_II_III Location: 5403 5-54260 bp Feature: gene Location: 54458-57340 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 55526-56123 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 55526-56123 bp Feature: domain Description: Cas1_I-II-III Location: 56357-57296 bp Feature: domain Description: Cas1_I-II-III Location: 563 57-57296 bp Feature: gene Location: 57772-57945 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cas2_I_II_III (cl11442), RVT-CRISPR, Cas1_I-II-III (cl00656)

Seq: QZKR01000148.1 (17301 bp)
Overview 1 RT 1: 587-12857 bp Neighborhood of RT #1 [587, 13285] SIR2_2 YjgR YjgR group_II_RT_mat RVT-UG6 nitrilase NACHT HEAT_2 HEAT_2 HEAT_2 HEAT_2 Feature: gene Location: 587-1615 bp Feature: domain Description: SIR2_2 Location: 977-1472 bp Feature: domain Description: SIR2_2 Location: 977-14 72 bp Feature: gene Location: 1619-3313 bp Feature: domain Description: YjgR Location: 1976-2294 bp Feature: domain Description: YjgR Location: 1976-2294 bp Feature: domain Description: YjgR Location: 2843-3203 bp Feature: domain Description: YjgR Location: 284 3-3203 bp Feature: gene Location: 3988-6645 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 4138-4354 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 4 138-4 354 bp Feature: RT Description: RVT-UG6 Note: UG6 RT Location: 4795-5107 bp Feature: RT Description: RVT-UG6 Note: UG6 RT Location: 4 795-5107 bp Feature: gene Location: 6642-8420 bp Feature: domain Description: nitrilase Location: 7980-8277 bp Feature: domain Description: nitrilase Location: 7980-8277 bp Feature: gene Location: 9032-13285 bp Feature: domain Description: NACHT Location: 9866-10238 bp Feature: domain Description: NACHT Location: 9866-10238 bp Feature: domain Description: HEAT_2 Location: 11375-11555 bp Feature: domain Description: HEAT_2 Location: 11375-11555 bp Feature: domain Description: HEAT_2 Location: 11756-11975 bp Feature: domain Description: HEAT_2 Location: 11756-11975 bp Feature: domain Description: HEAT_2 Location: 12482-12623 bp Feature: domain Description: HEAT_2 Location: 124 82-12623 bp Feature: domain Description: HEAT_2 Location: 12674-12857 bp Feature: domain Description: HEAT_2 Location: 12674 -12857 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SIR2_2 (pfam13289), YjgR (COG0433), group_II_RT_mat (TIGR04416), RVT-UG6, nitrilase (cl11424), NACHT (pfam05729), HEAT_2 (pfam13646)