myRT

myRT report for GCA_003602335.1_ASM360233v1

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Seq: RAHD01000086.1 (13794 bp)
Overview 1 RT 1: 1-3416 bp Neighborhood of RT #1 [1, 3469] PHA02517 RVT-GII GIIM PHA02517 autotrans_barl Feature: gene Location: 1-171 bp Feature: domain Description: PHA02517 Location: 4-106 bp Feature: domain Description: PHA0251 7 Location: 4-1 06 bp Feature: gene Location: 763-2286 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1036-1768 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 036-1 768 bp Feature: domain Description: GIIM Note: maturase Location: 1843-2041 bp Feature: domain Description: GIIM Note: maturase Location: 1 843-2041 bp Feature: gene Location: 2463-2849 bp Feature: domain Description: PHA02517 Location: 2466-2847 bp Feature: domain Description: PHA0251 7 Location: 2466-2847 bp Feature: gene Location: 2852-3469 bp Feature: domain Description: autotrans_barl Location: 2975-3416 bp Feature: domain Description: autotrans_barl Location: 2975-341 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), autotrans_barl (TIGR01414)

Seq: RAHD01000060.1 (45640 bp)
Overview 1 RT 1: 2267-6208 bp Neighborhood of RT #1 [2267, 6208] RVT-Retrons Feature: gene Location: 2267-3406 bp Feature: gene Location: 3452-3619 bp Feature: gene Location: 3641-5413 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3800-4418 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3800-4418 bp Feature: gene Location: 5634-5777 bp Feature: gene Location: 5969-6208 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: RAHD01000105.1 (12581 bp)
Overview 1 RT 1: 7087-10960 bp Neighborhood of RT #1 [7087, 11331] SLATT_5 RVT-UG17 Caudo_TAP Macro_Appr_pase Feature: gene Location: 7087-7263 bp Feature: gene Location: 7671-8375 bp Feature: domain Description: SLATT_5 Location: 7833-8343 bp Feature: domain Description: SLATT_5 Location: 783 3 -83 43 bp Feature: gene Location: 8353-9723 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 8581-9187 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 8581-9187 bp Feature: gene Location: 9836-10420 bp Feature: domain Description: Caudo_TAP Location: 10052-10409 bp Feature: domain Description: Caudo_TAP Location: 10052-10409 bp Feature: gene Location: 10429-11331 bp Feature: domain Description: Macro_Appr_pase Location: 10447-10960 bp Feature: domain Description: Macro_Appr_pase Location: 10447-10960 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17, Caudo_TAP (pfam02413), Macro_Appr_pase (cd02900)

Seq: RAHD01000042.1 (24754 bp)
Overview 1 RT 1: 19362-23090 bp Neighborhood of RT #1 [19362, 23095] RVT-GII Intron_maturas2 HNHc PRK13732 DUF905 Feature: gene Location: 19362-19568 bp Feature: gene Location: 19902-20111 bp Feature: gene Location: 20246-22147 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20513-21344 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20513-2134 4 bp Feature: domain Description: Intron_maturas2 Location: 21458-21716 bp Feature: domain Description: Intron_maturas2 Location: 214 58-21716 bp Feature: domain Description: HNHc Note: nucleases Location: 21890-22052 bp Feature: domain Description: HNHc Note: nucleases Location: 21890-22052 bp Feature: gene Location: 22342-22794 bp Feature: domain Description: PRK13732 Location: 22348-22792 bp Feature: domain Description: PRK13732 Location: 2234 8-22792 bp Feature: gene Location: 22862-23095 bp Feature: domain Description: DUF905 Location: 22892-23090 bp Feature: domain Description: DUF905 Location: 22892-23090 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PRK13732 (single-stranded DNA-binding protein; Provisional), DUF905 (pfam06006)