myRT

myRT report for GCA_003602705.1_ASM360270v1

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Seq: QTLK01000069.1 (1901 bp)
Overview 1 RT 1: 90-1711 bp Neighborhood of RT #1 [90, 1711] RVT-GII GIIM Feature: gene Location: 90-1358 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 294-951 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 294-951 bp Feature: domain Description: GIIM Note: maturase Location: 1038-1239 bp Feature: domain Description: GIIM Note: maturase Location: 1 038-1 239 bp Feature: gene Location: 1377-1556 bp Feature: gene Location: 1565-1711 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: QTLK01000003.1 (298042 bp)
Overview 1 RT 1: 63265-75579 bp Neighborhood of RT #1 [63265, 75704] rpsA DUF4011 DEXXQc_SF1 DEXXQc_SF1 TIGR00376 MTES_1575 DUF3320 RVT-Retrons PDDEXK_2 Feature: gene Location: 63265-65064 bp Feature: domain Description: rpsA Location: 63334-64933 bp Feature: domain Description: rpsA Location: 63334-64933 bp Feature: gene Location: 65161-71202 bp Feature: domain Description: DUF4011 Location: 66391-66904 bp Feature: domain Description: DUF4011 Location: 66391-66904 bp Feature: domain Description: DEXXQc_SF1 Location: 67243-67672 bp Feature: domain Description: DEXXQc_SF1 Location: 672 43-67672 bp Feature: domain Description: DEXXQc_SF1 Location: 68671-69430 bp Feature: domain Description: DEXXQc_SF1 Location: 68671-69430 bp Feature: domain Description: TIGR00376 Location: 69559-69949 bp Feature: domain Description: TIGR00376 Location: 69559-69949 bp Feature: domain Description: MTES_1575 Location: 70102-70387 bp Feature: domain Description: MTES_1575 Location: 70102 -70387 bp Feature: domain Description: DUF3320 Location: 70717-70852 bp Feature: domain Description: DUF332 0 Location: 70717-70852 bp Feature: gene Location: 71253-72383 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 71574-72117 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 71574-72 117 bp Feature: gene Location: 72591-74798 bp Feature: gene Location: 74967-75704 bp Feature: domain Description: PDDEXK_2 Location: 74973-75579 bp Feature: domain Description: PDDEXK_2 Location: 74973-75579 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: QTLK01000065.1 (2486 bp)
Overview 1 RT 1: 118-1894 bp Neighborhood of RT #1 [118, 1923] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 118-1923 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 382-1204 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 82-1204 bp Feature: domain Description: Intron_maturas2 Location: 1282-1582 bp Feature: domain Description: Intron_maturas2 Location: 1282-1582 bp Feature: domain Description: HNHc Note: nucleases Location: 1750-1894 bp Feature: domain Description: HNHc Note: nucleases Location: 1750-1894 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: QTLK01000001.1 (378072 bp)
Overview 1 RT 1: 27094-33136 bp Neighborhood of RT #1 [27094, 33789] NGN_SP_UpxY KOW_NusG Phage_int_SAM_5 INTN1_C_like RVT-Retrons REC Feature: gene Location: 27094-27672 bp Feature: domain Description: NGN_SP_UpxY Location: 27172-27454 bp Feature: domain Description: NGN_SP_UpxY Location: 27172-274 54 bp Feature: domain Description: KOW_NusG Location: 27505-27616 bp Feature: domain Description: KOW_NusG Location: 27505-27616 bp Feature: gene Location: 28007-28972 bp Feature: domain Description: Phage_int_SAM_5 Location: 28040-28283 bp Feature: domain Description: Phage_int_SAM_5 Location: 2804 0-28283 bp Feature: domain Description: INTN1_C_like Location: 28364-28886 bp Feature: domain Description: INTN1_C_like Location: 28364 -28886 bp Feature: gene Location: 29248-31467 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 29449-30034 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 294 4 9-30034 bp Feature: gene Location: 31445-32089 bp Feature: gene Location: 32086-33789 bp Feature: domain Description: REC Location: 32905-33136 bp Feature: domain Description: REC Location: 32905-33136 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: QTLK01000048.1 (11551 bp)
Overview 1 RT 1: 176-6465 bp Neighborhood of RT #1 [176, 6590] DUF4133 Bac_Flav_CT_G RVT-GII Intron_maturas2 HNHc DUF3876 DUF4141 SesA Feature: gene Location: 176-508 bp Feature: domain Description: DUF4133 Location: 194-464 bp Feature: domain Description: DUF4133 Location: 194-464 bp Feature: gene Location: 505-2904 bp Feature: domain Description: Bac_Flav_CT_G Location: 508-2896 bp Feature: domain Description: Bac_Flav_CT_G Location: 5 08-2896 bp Feature: gene Location: 3473-5296 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3737-4559 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3737-45 5 9 bp Feature: domain Description: Intron_maturas2 Location: 4733-4976 bp Feature: domain Description: Intron_maturas2 Location: 4733-4976 bp Feature: domain Description: HNHc Note: nucleases Location: 5087-5258 bp Feature: domain Description: HNHc Note: nucleases Location: 5 087-5 25 8 bp Feature: gene Location: 5557-5937 bp Feature: domain Description: DUF3876 Location: 5638-5902 bp Feature: domain Description: DUF3876 Location: 5 638-5 902 bp Feature: gene Location: 5979-6590 bp Feature: domain Description: DUF4141 Location: 5982-6129 bp Feature: domain Description: DUF4141 Location: 5 982-6129 bp Feature: domain Description: SesA Location: 6135-6465 bp Feature: domain Description: SesA Location: 6135 -6465 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: QTLK01000068.1 (2209 bp)
Overview 1 RT 1: 106-2140 bp Neighborhood of RT #1 [106, 2140] RVT_N RVT-GII GIIM Feature: gene Location: 106-1653 bp Feature: domain Description: RVT_N Location: 175-418 bp Feature: domain Description: RVT_N Location: 175-418 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 463-1108 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 46 3-1108 bp Feature: domain Description: GIIM Note: maturase Location: 1162-1396 bp Feature: domain Description: GIIM Note: maturase Location: 116 2-1396 bp Feature: gene Location: 1693-1875 bp Feature: gene Location: 2009-2140 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT