myRT

myRT report for GCA_003602805.1_ASM360280v1

Download annotations/find similar RTs

Seq: QTLX01000001.1 (380383 bp)
Overview 1 RT 1: 240866-247606 bp Neighborhood of RT #1 [240866, 247695] RVT-Retrons UvrD UvrD UvrD Feature: gene Location: 240866-241360 bp Feature: gene Location: 241592-242491 bp Feature: gene Location: 242493-243953 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 242694-243324 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 242694-243324 bp Feature: gene Location: 244289-246058 bp Feature: gene Location: 246067-247695 bp Feature: domain Description: UvrD Location: 246094-246211 bp Feature: domain Description: UvrD Location: 246094-24621 1 bp Feature: domain Description: UvrD Location: 246880-247381 bp Feature: domain Description: UvrD Location: 246880-247381 bp Feature: domain Description: UvrD Location: 247453-247606 bp Feature: domain Description: UvrD Location: 247453-247606 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: QTLX01000068.1 (3500 bp)
Overview 1 RT 1: 381-3490 bp Neighborhood of RT #1 [381, 3498] COG2369 LPD3 RVT-DGRs Feature: gene Location: 381-1235 bp Feature: gene Location: 1316-2125 bp Feature: domain Description: COG2369 Location: 1364-1508 bp Feature: domain Description: COG2 369 Location: 1364-1508 bp Feature: domain Description: LPD3 Location: 1775-2048 bp Feature: domain Description: LPD3 Location: 1775-2 048 bp Feature: gene Location: 2887-3498 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3097-3490 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3097-3490 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: QTLX01000005.1 (195231 bp)
Overview 1 RT 1: 125119-129974 bp Neighborhood of RT #1 [125119, 129974] Bac_Flav_CT_G RVT_N RVT-GII GIIM Bac_Flav_CT_G Feature: gene Location: 125119-125715 bp Feature: gene Location: 125359-126942 bp Feature: domain Description: Bac_Flav_CT_G Location: 125365-126940 bp Feature: domain Description: Bac_Flav_CT_G Location: 1253 65-126940 bp Feature: gene Location: 127573-129219 bp Feature: domain Description: RVT_N Location: 127627-127870 bp Feature: domain Description: RVT_N Location: 127627-127870 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 127915-128560 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 127915-128560 bp Feature: domain Description: GIIM Note: maturase Location: 128614-128845 bp Feature: domain Description: GIIM Note: maturase Location: 128614-128845 bp Feature: gene Location: 129228-129836 bp Feature: domain Description: Bac_Flav_CT_G Location: 129345-129804 bp Feature: domain Description: Bac_Flav_CT_G Location: 1293 45-129804 bp Feature: gene Location: 129843-129974 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: QTLX01000042.1 (40413 bp)
Overview 1 RT 1: 21-4419 bp Neighborhood of RT #1 [21, 4433] Bac_Flav_CT_G RVT_N RVT-GII GIIM Bac_Flav_CT_G Feature: gene Location: 21-1253 bp Feature: domain Description: Bac_Flav_CT_G Location: 141-1248 bp Feature: domain Description: Bac_Flav_CT_G Location: 14 1-124 8 bp Feature: gene Location: 1250-2911 bp Feature: domain Description: RVT_N Location: 1304-1547 bp Feature: domain Description: RVT_N Location: 1304 -154 7 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1592-2240 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1592-224 0 bp Feature: domain Description: GIIM Note: maturase Location: 2294-2525 bp Feature: domain Description: GIIM Note: maturase Location: 2294 -2525 bp Feature: gene Location: 2993-3373 bp Feature: gene Location: 3495-4433 bp Feature: domain Description: Bac_Flav_CT_G Location: 3498-4419 bp Feature: domain Description: Bac_Flav_CT_G Location: 34 98-4 4 19 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: QTLX01000078.1 (2404 bp)
Overview 1 RT 1: 202-1907 bp Neighborhood of RT #1 [202, 2287] RVT_N RVT-GII GIIM Feature: gene Location: 202-549 bp Feature: gene Location: 587-2287 bp Feature: domain Description: RVT_N Location: 686-929 bp Feature: domain Description: RVT_N Location: 686-929 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 974-1622 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 974-1622 bp Feature: domain Description: GIIM Note: maturase Location: 1673-1907 bp Feature: domain Description: GIIM Note: maturase Location: 1673-1907 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: QTLX01000032.1 (62742 bp)
Overview 1 RT 1: 49361-58804 bp Neighborhood of RT #1 [49361, 58804] Laminin_G_3 Laminin_G_3 RVT-DGRs Feature: gene Location: 49361-56080 bp Feature: domain Description: Laminin_G_3 Location: 50804-50882 bp Feature: domain Description: Laminin_G_3 Location: 50804-50882 bp Feature: domain Description: Laminin_G_3 Location: 51533-51959 bp Feature: domain Description: Laminin_G_3 Location: 51533-51959 bp Feature: gene Location: 56324-56494 bp Feature: gene Location: 56596-57900 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 56809-57403 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 56 809-57403 bp Feature: gene Location: 57897-58382 bp Feature: gene Location: 58562-58804 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT