myRT

myRT report for GCA_003602965.1_ASM360296v1

Download annotations/find similar RTs

Seq: QTMC01000014.1 (137520 bp)
Overview 1 RT 1: 125768-129838 bp Neighborhood of RT #1 [125768, 129915] RVT-DGRs TipAS COG2369 LPD3 Feature: gene Location: 125768-126010 bp Feature: gene Location: 126214-126699 bp Feature: gene Location: 126696-127997 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 126909-127506 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 26909-1 27506 bp Feature: gene Location: 128373-128606 bp Feature: gene Location: 128704-129915 bp Feature: domain Description: TipAS Location: 128728-129031 bp Feature: domain Description: TipAS Location: 1 28728-1 29031 bp Feature: domain Description: COG2369 Location: 129151-129337 bp Feature: domain Description: COG2369 Location: 1 291 51 -1 29337 bp Feature: domain Description: LPD3 Location: 129556-129838 bp Feature: domain Description: LPD3 Location: 1 29556-1 29838 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, TipAS (pfam07739), COG2369 (Uncharacterized conserved protein, contains phage Mu gpF-like domain ), LPD3 (pfam18798)

Seq: QTMC01000004.1 (303429 bp)
Overview 1 RT 1: 249861-253794 bp Neighborhood of RT #1 [249861, 253794] RVT-UG27 Feature: gene Location: 249861-250508 bp Feature: gene Location: 250522-251190 bp Feature: gene Location: 251183-252445 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 251375-252011 bp Feature: RT Description: RVT-UG2 7 Note: UG2 7 RT Location: 2 51375-2 52 011 bp Feature: gene Location: 252768-253265 bp Feature: gene Location: 253315-253794 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27

Seq: QTMC01000007.1 (209039 bp)
Overview 1 RT 1: 56758-61690 bp Neighborhood of RT #1 [56758, 61953] YWFCY RVT_N RVT-GII GIIM TraG-D_C DUF4326 Feature: gene Location: 56758-57681 bp Feature: domain Description: YWFCY Location: 56764-56941 bp Feature: domain Description: YWFCY Location: 56764-56941 bp Feature: gene Location: 58019-58153 bp Feature: gene Location: 58319-59971 bp Feature: domain Description: RVT_N Location: 58373-58616 bp Feature: domain Description: RVT_N Location: 583 73 -58616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58661-59309 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58661-593 09 bp Feature: domain Description: GIIM Note: maturase Location: 59363-59594 bp Feature: domain Description: GIIM Note: maturase Location: 593 63 -59594 bp Feature: gene Location: 59976-61202 bp Feature: domain Description: TraG-D_C Location: 60558-60891 bp Feature: domain Description: TraG-D_C Location: 60558-60891 bp Feature: gene Location: 61420-61953 bp Feature: domain Description: DUF4326 Location: 61435-61690 bp Feature: domain Description: DUF43 26 Location: 6143 5-61690 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YWFCY (pfam14293), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), TraG-D_C (pfam12696), DUF4326 (pfam14216)

Seq: QTMC01000041.1 (2321 bp)
Overview 1 RT 1: 3-1220 bp Neighborhood of RT #1 [3, 1220] RVT-DGRs Feature: gene Location: 3-611 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 216-606 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 216-606 bp Feature: gene Location: 708-965 bp Feature: gene Location: 987-1220 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs