myRT

myRT report for GCA_003603175.1_ASM360317v1

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Seq: QTML01000026.1 (49658 bp)
Overview 1 RT 1: 31328-38212 bp Neighborhood of RT #1 [31328, 38212] AAA_25 RVT-GII Intron_maturas2 Toprim_2 Feature: gene Location: 31328-32875 bp Feature: domain Description: AAA_25 Location: 31943-32405 bp Feature: domain Description: AAA_25 Location: 31 943-32405 bp Feature: gene Location: 33087-33269 bp Feature: gene Location: 33817-35625 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34081-34903 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 34081 -34903 bp Feature: domain Description: Intron_maturas2 Location: 34972-35281 bp Feature: domain Description: Intron_maturas2 Location: 34972-35281 bp Feature: gene Location: 35579-36526 bp Feature: domain Description: Toprim_2 Location: 36149-36437 bp Feature: domain Description: Toprim_2 Location: 361 49-36437 bp Feature: gene Location: 36809-38212 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_25 (pfam13481), RVT-GII, Intron_maturas2 (pfam01348), Toprim_2 (pfam13155)

Seq: QTML01000029.1 (28732 bp)
Overview 1 RT 1: 9095-13160 bp Neighborhood of RT #1 [9095, 13219] Bac_Flav_CT_J RVT-GII Intron_maturas2 HNHc DUF4141 Feature: gene Location: 9095-10096 bp Feature: domain Description: Bac_Flav_CT_J Location: 9122-10085 bp Feature: domain Description: Bac_Flav_CT_J Location: 912 2 -10085 bp Feature: gene Location: 10110-10646 bp Feature: gene Location: 10639-12474 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10933-11755 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10933-11755 bp Feature: domain Description: Intron_maturas2 Location: 11914-12283 bp Feature: domain Description: Intron_maturas2 Location: 11914-12 2 83 bp Feature: domain Description: HNHc Note: nucleases Location: 12307-12448 bp Feature: domain Description: HNHc Note: nucleases Location: 12 307-12 448 bp Feature: gene Location: 12794-12955 bp Feature: gene Location: 12995-13219 bp Feature: domain Description: DUF4141 Location: 13007-13160 bp Feature: domain Description: DUF4141 Location: 13007-13160 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Bac_Flav_CT_J (TIGR03782), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), DUF4141 (pfam13605)

Seq: QTML01000003.1 (396570 bp)
Overview 1 RT 1: 53985-57193 bp Neighborhood of RT #1 [53985, 57193] RVT-UG27 Feature: gene Location: 53985-54263 bp Feature: gene Location: 54293-54559 bp Feature: gene Location: 54609-55871 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 54801-55437 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 54801-5543 7 bp Feature: gene Location: 55864-56532 bp Feature: gene Location: 56546-57193 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27