myRT

myRT report for GCA_003603395.1_ASM360339v1

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Seq: QTNB01000052.1 (2495 bp)
Overview 1 RT 1: 114-1581 bp Neighborhood of RT #1 [114, 1922] RVT-GII Intron_maturas2 Feature: gene Location: 114-1922 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 378-1200 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 378-1 200 bp Feature: domain Description: Intron_maturas2 Location: 1359-1581 bp Feature: domain Description: Intron_maturas2 Location: 1 359-1 581 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348)

Seq: QTNB01000006.1 (255991 bp)
Overview 1 RT 1: 13108-17770 bp 2 RT 2: 112017-115225 bp Neighborhood of RT #1 [13108, 17847] RVT-DGRs Phage_Mu_F LPD3 Neighborhood of RT #2 [112017, 115225] RVT-UG27 Feature: gene Location: 13108-13350 bp Feature: gene Location: 13549-14034 bp Feature: gene Location: 14031-15332 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 14241-14841 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 142 41-14841 bp Feature: gene Location: 15714-15998 bp Feature: gene Location: 16045-17847 bp Feature: domain Description: Phage_Mu_F Location: 16936-17221 bp Feature: domain Description: Phage_Mu_F Location: 16936-172 2 1 bp Feature: domain Description: LPD3 Location: 17497-17770 bp Feature: domain Description: LPD3 Location: 17497-17770 bp Feature: gene Location: 112017-112295 bp Feature: gene Location: 112325-112591 bp Feature: gene Location: 112641-113903 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 112833-113469 bp Feature: RT Description: RVT-UG2 7 Note: UG2 7 RT Location: 112 833-113469 bp Feature: gene Location: 113896-114564 bp Feature: gene Location: 114578-115225 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Phage_Mu_F (pfam04233), LPD3 (pfam18798), RVT-UG27

Seq: QTNB01000001.1 (1003705 bp)
Overview 1 RT 1: 999798-1003703 bp Neighborhood of RT #1 [999798, 1003703] Bac_Flav_CT_J RVT-GII Intron_maturas2 HNHc Feature: gene Location: 999798-1000802 bp Feature: domain Description: Bac_Flav_CT_J Location: 999804-1000773 bp Feature: domain Description: Bac_Flav_CT_J Location: 999804-1000773 bp Feature: gene Location: 1000806-1001342 bp Feature: gene Location: 1001335-1003170 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1001629-1002451 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1001629-1002451 bp Feature: domain Description: Intron_maturas2 Location: 1002610-1002979 bp Feature: domain Description: Intron_maturas2 Location: 1002610-1002979 bp Feature: domain Description: HNHc Note: nucleases Location: 1003003-1003144 bp Feature: domain Description: HNHc Note: nucleases Location: 1003 003 -1003 144 bp Feature: gene Location: 1003572-1003703 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Bac_Flav_CT_J (TIGR03782), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: QTNB01000005.1 (274056 bp)
Overview 1 RT 1: 236600-239979 bp Neighborhood of RT #1 [236600, 239979] RVT-DGRs Feature: gene Location: 236600-237919 bp Feature: gene Location: 237949-238152 bp Feature: gene Location: 238436-239251 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 238769-239093 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 238769-239093 bp Feature: gene Location: 239217-239447 bp Feature: gene Location: 239395-239979 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs