myRT

myRT report for GCA_003610155.1_ASM361015v1

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Seq: RAIN01000022.1 (85141 bp)
Overview 1 RT 1: 72918-85138 bp Neighborhood of RT #1 [72918, 85138] COG3183 Mrr_cat RVT-AbiP2 HTH_XRE RVT-Retrons Feature: gene Location: 72918-73820 bp Feature: domain Description: COG3183 Location: 73500-73803 bp Feature: domain Description: COG31 83 Location: 73500-73803 bp Feature: gene Location: 74201-75067 bp Feature: domain Description: Mrr_cat Location: 74657-74969 bp Feature: domain Description: Mrr_cat Location: 74657-74969 bp Feature: gene Location: 75064-76560 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 75481-75928 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 75481 -75928 bp Feature: gene Location: 77373-77753 bp Feature: gene Location: 77837-78055 bp Feature: gene Location: 78829-82626 bp Feature: gene Location: 83226-83549 bp Feature: domain Description: HTH_XRE Location: 83262-83424 bp Feature: domain Description: HTH_XRE Location: 83262-83424 bp Feature: gene Location: 83668-84591 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 83719-84226 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8371 9-84226 bp Feature: gene Location: 84869-85138 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3183 (Predicted restriction endonuclease, HNH family ), Mrr_cat (pfam04471), RVT-AbiP2, HTH_XRE (smart00530), RVT-Retrons

Seq: RAIN01000066.1 (1076 bp)
Overview 1 RT 1: 2-984 bp Neighborhood of RT #1 [2, 1061] RVT-GII Feature: gene Location: 2-130 bp Feature: gene Location: 642-1061 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 858-984 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 858-984 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: RAIN01000023.1 (82071 bp)
Overview 1 RT 1: 31359-34201 bp Neighborhood of RT #1 [31359, 34201] Rve RVT-GII GIIM Feature: gene Location: 31359-31496 bp Feature: gene Location: 31682-32170 bp Feature: domain Description: Rve Location: 31712-32120 bp Feature: domain Description: Rve Location: 3 1712-3 2120 bp Feature: gene Location: 32209-33468 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32413-33067 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 2413 -3 3 067 bp Feature: domain Description: GIIM Note: maturase Location: 33151-33379 bp Feature: domain Description: GIIM Note: maturase Location: 3 3 151-3 3 3 79 bp Feature: gene Location: 33398-33754 bp Feature: gene Location: 33962-34201 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rve (COG3316), RVT-GII, GIIM (pfam08388)