myRT

myRT report for GCA_003610895.1_ASM361089v1

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Seq: MCAS01000011.1 (166493 bp)
Overview 1 RT 1: 161853-166255 bp Neighborhood of RT #1 [161853, 166407] YfcE MFS_ProP RVT-GII GIIM Feature: gene Location: 161853-162341 bp Feature: domain Description: YfcE Location: 161889-162318 bp Feature: domain Description: YfcE Location: 1 61 889-1 6231 8 bp Feature: gene Location: 162483-163985 bp Feature: domain Description: MFS_ProP Location: 162621-163857 bp Feature: domain Description: MFS_ProP Location: 1 62621 -1 63857 bp Feature: gene Location: 165028-166407 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 165373-165988 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 65373-1 65988 bp Feature: domain Description: GIIM Note: maturase Location: 166045-166255 bp Feature: domain Description: GIIM Note: maturase Location: 1 66045-1 66255 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YfcE (COG0622), MFS_ProP (cd17366), RVT-GII, GIIM (pfam08388)

Seq: MCAS01000019.1 (120786 bp)
Overview 1 RT 1: 26645-34188 bp Neighborhood of RT #1 [26645, 34205] DUF2235 DUF2235 RVT-Retrons AraC GyrI-like 2A0305 Feature: gene Location: 26645-28996 bp Feature: domain Description: DUF2235 Location: 26777-27485 bp Feature: domain Description: DUF2 2 35 Location: 2 6777-2 7485 bp Feature: domain Description: DUF2235 Location: 27530-27872 bp Feature: domain Description: DUF2 2 35 Location: 2 7530-2 7872 bp Feature: gene Location: 29117-29560 bp Feature: gene Location: 29629-31197 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 30295-30934 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 302 95-30934 bp Feature: gene Location: 31680-32546 bp Feature: domain Description: AraC Location: 31701-32025 bp Feature: domain Description: AraC Location: 31701-32 02 5 bp Feature: domain Description: GyrI-like Location: 32079-32541 bp Feature: domain Description: GyrI-like Location: 32 079-32 541 bp Feature: gene Location: 32685-34205 bp Feature: domain Description: 2A0305 Location: 32847-34188 bp Feature: domain Description: 2 A0305 Location: 32 847-34188 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2235 (pfam09994), RVT-Retrons, AraC (COG2207), GyrI-like (pfam06445), 2A0305 (TIGR00908)

Seq: MCAS01000008.1 (202995 bp)
Overview 1 RT 1: 198286-202441 bp Neighborhood of RT #1 [198286, 202593] PRK15136 efflux_EmrB RVT-GII GIIM Feature: gene Location: 198286-199512 bp Feature: domain Description: PRK15136 Location: 198301-199447 bp Feature: domain Description: PRK1513 6 Location: 1983 01-199447 bp Feature: gene Location: 199544-201106 bp Feature: domain Description: efflux_EmrB Location: 199607-201050 bp Feature: domain Description: efflux_EmrB Location: 199607-201050 bp Feature: gene Location: 201226-202593 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 201559-202174 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 201559-202174 bp Feature: domain Description: GIIM Note: maturase Location: 202231-202441 bp Feature: domain Description: GIIM Note: maturase Location: 20223 1-202441 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15136 (multidrug efflux MFS transporter periplasmic adaptor subunit EmrA), efflux_EmrB (TIGR00711), RVT-GII, GIIM (pfam08388)

Seq: MCAS01000068.1 (275148 bp)
Overview 1 RT 1: 93650-97211 bp Neighborhood of RT #1 [93650, 97211] RVT-AbiP2 Acetyltransf_1 Feature: gene Location: 93650-93787 bp Feature: gene Location: 93859-94236 bp Feature: gene Location: 94630-96126 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 95047-95500 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 9504 7-95500 bp Feature: gene Location: 96370-96840 bp Feature: domain Description: Acetyltransf_1 Location: 96454-96781 bp Feature: domain Description: Acetyltransf_1 Location: 964 54 -96781 bp Feature: gene Location: 96954-97211 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2, Acetyltransf_1 (pfam00583)

Seq: MCAS01000004.1 (250974 bp)
Overview 1 RT 1: 247683-250736 bp Neighborhood of RT #1 [247683, 250888] rbfA truB RVT-GII GIIM Feature: gene Location: 247683-248015 bp Feature: domain Description: rbfA Location: 247689-248007 bp Feature: domain Description: rbfA Location: 247689-248007 bp Feature: gene Location: 248102-249037 bp Feature: domain Description: truB Location: 248108-249026 bp Feature: domain Description: truB Location: 248108-249026 bp Feature: gene Location: 249509-250888 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 249854-250469 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24985 4-25 0469 bp Feature: domain Description: GIIM Note: maturase Location: 250526-250736 bp Feature: domain Description: GIIM Note: maturase Location: 25 05 26-25 0736 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rbfA (TIGR00082), truB (PRK14846), RVT-GII, GIIM (pfam08388)

Seq: MCAS01000006.1 (218176 bp)
Overview 1 RT 1: 391-3641 bp Neighborhood of RT #1 [391, 3643] RVT-GII GIIM Iron_traffic PRK05279 Feature: gene Location: 391-1770 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 736-1351 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 736 -1351 bp Feature: domain Description: GIIM Note: maturase Location: 1408-1618 bp Feature: domain Description: GIIM Note: maturase Location: 1408-16 18 bp Feature: gene Location: 1924-2199 bp Feature: domain Description: Iron_traffic Location: 1927-2188 bp Feature: domain Description: Iron_traffic Location: 1927-2188 bp Feature: gene Location: 2255-3643 bp Feature: domain Description: PRK05279 Location: 2333-3641 bp Feature: domain Description: PRK05279 Location: 2333-36 41 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Iron_traffic (pfam04362), PRK05279 (N-acetylglutamate synthase; Validated)