myRT

myRT report for GCA_003611835.1_ASM361183v1

Download annotations/find similar RTs

Seq: RAYN01000047.1 (32344 bp)
Overview 1 RT 1: 28664-32043 bp Neighborhood of RT #1 [28664, 32126] MFS_SV2_like YiiL_rotase RVT-GII GIIM RVT-GII Feature: gene Location: 28664-29980 bp Feature: domain Description: MFS_SV2_like Location: 28718-29879 bp Feature: domain Description: MFS_SV2_like Location: 2871 8-29879 bp Feature: gene Location: 29998-30312 bp Feature: domain Description: YiiL_rotase Location: 30007-30310 bp Feature: domain Description: YiiL_rotase Location: 30007-3031 0 bp Feature: gene Location: 30739-31554 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30742-31102 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30742-31 1 02 bp Feature: domain Description: GIIM Note: maturase Location: 31165-31372 bp Feature: domain Description: GIIM Note: maturase Location: 31 1 65-31 372 bp Feature: gene Location: 31590-32126 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31911-32043 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 91 1 -32043 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_SV2_like (cd17316), YiiL_rotase (TIGR02625), RVT-GII, GIIM (pfam08388)

Seq: RAYN01000059.1 (13560 bp)
Overview 1 RT 1: 2-2492 bp Neighborhood of RT #1 [2, 2492] RVT-GII GIIM RVT-GII NAD_bind_1_Glu_DH Feature: gene Location: 2-928 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-527 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-52 7 bp Feature: domain Description: GIIM Note: maturase Location: 608-824 bp Feature: domain Description: GIIM Note: maturase Location: 608-82 4 bp Feature: gene Location: 1049-1333 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1052-1163 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1052 -1163 bp Feature: gene Location: 1436-1906 bp Feature: domain Description: NAD_bind_1_Glu_DH Location: 1445-1904 bp Feature: domain Description: NAD_bind_1_Glu_DH Location: 1445-1904 bp Feature: gene Location: 2331-2492 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), NAD_bind_1_Glu_DH (cd01076)

Seq: RAYN01000063.1 (12102 bp)
Overview 1 RT 1: 1-2779 bp Neighborhood of RT #1 [1, 2779] group_II_RT_mat RVT-CRISPR-like FliA Feature: gene Location: 1-165 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 37-166 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 3 7-166 bp Feature: gene Location: 688-942 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 826-922 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 826-922 bp Feature: gene Location: 1805-2269 bp Feature: domain Description: FliA Location: 1994-2237 bp Feature: domain Description: FliA Location: 1994-223 7 bp Feature: gene Location: 2450-2779 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), RVT-CRISPR, FliA (COG1191)

Seq: RAYN01000128.1 (806 bp)
Overview 1 RT 1: 3-618 bp Neighborhood of RT #1 [3, 803] RVT-UG19 RVT-UG19 Feature: gene Location: 3-803 bp Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 147-276 bp Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 14 7-276 bp Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 381-618 bp Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 381-618 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG19

Seq: RAYN01000022.1 (70244 bp)
Overview 1 RT 1: 2-2282 bp Neighborhood of RT #1 [2, 2296] RVT-GII BglG PTS_IIB_bgl_like PtsN Feature: gene Location: 2-148 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-116 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5 -116 bp Feature: gene Location: 320-1561 bp Feature: domain Description: BglG Location: 338-1559 bp Feature: domain Description: BglG Location: 338-15 5 9 bp Feature: gene Location: 1628-2296 bp Feature: domain Description: PTS_IIB_bgl_like Location: 1670-1835 bp Feature: domain Description: PTS_IIB_bgl_like Location: 1670-1835 bp Feature: domain Description: PtsN Location: 1868-2282 bp Feature: domain Description: PtsN Location: 1868-2282 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, BglG (COG3711), PTS_IIB_bgl_like (cd05568), PtsN (COG1762)