myRT

myRT report for GCA_003611855.1_ASM361185v1

Download annotations/find similar RTs

Seq: RAYP01000049.1 (21599 bp)
Overview 1 RT 1: 48-3498 bp Neighborhood of RT #1 [48, 3498] HELICc RVT-GII HNHc Feature: gene Location: 48-695 bp Feature: domain Description: HELICc Location: 255-612 bp Feature: domain Description: HELICc Location: 255-61 2 bp Feature: gene Location: 702-2612 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1011-1752 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 01 1 -1 752 bp Feature: domain Description: HNHc Note: nucleases Location: 2316-2478 bp Feature: domain Description: HNHc Note: nucleases Location: 231 6-2478 bp Feature: gene Location: 2659-2916 bp Feature: gene Location: 3286-3498 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HELICc (smart00490), RVT-GII, HNHc (smart00507)

Seq: RAYP01000001.1 (332327 bp)
Overview 1 RT 1: 293812-299831 bp Neighborhood of RT #1 [293812, 299831] TTHA1623-like_MBL-fold rSAM_HemZ RVT-Retrons PAS_3 TMAO_torS Feature: gene Location: 293812-294462 bp Feature: domain Description: TTHA1623-like_MBL-fold Location: 293833-294436 bp Feature: domain Description: TTHA162 3-like_MBL-fold Location: 2 93833-2 94436 bp Feature: gene Location: 294525-296054 bp Feature: domain Description: rSAM_HemZ Location: 294807-296034 bp Feature: domain Description: rSAM_HemZ Location: 2 94807-2 96034 bp Feature: gene Location: 296051-297112 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 296234-296852 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 962 34-2 96852 bp Feature: gene Location: 297212-299518 bp Feature: domain Description: PAS_3 Location: 297542-297722 bp Feature: domain Description: PAS_3 Location: 2 97542 -2 9772 2 bp Feature: domain Description: TMAO_torS Location: 298313-299477 bp Feature: domain Description: TMAO_torS Location: 2 98313-2 99477 bp Feature: gene Location: 299451-299831 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TTHA1623-like_MBL-fold (cd16322), rSAM_HemZ (TIGR03994), RVT-Retrons, PAS_3 (pfam08447), TMAO_torS (TIGR02956)

Seq: RAYP01001418.1 (642 bp)
Overview 1 RT 1: 1-298 bp Neighborhood of RT #1 [1, 639] RVT-UG10 Feature: gene Location: 1-639 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 73-298 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 73 -298 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG10

Seq: RAYP01000488.1 (2356 bp)
Overview 1 RT 1: 34-1865 bp Neighborhood of RT #1 [34, 2272] RVT_N RVT-GII GIIM Feature: gene Location: 34-237 bp Feature: gene Location: 491-2272 bp Feature: domain Description: RVT_N Location: 644-887 bp Feature: domain Description: RVT_N Location: 64 4 -887 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 932-1580 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 932-1580 bp Feature: domain Description: GIIM Note: maturase Location: 1634-1865 bp Feature: domain Description: GIIM Note: maturase Location: 1634 -1865 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: RAYP01000444.1 (2581 bp)
Overview 1 RT 1: 1-2378 bp Neighborhood of RT #1 [1, 2378] RVT-UG10 Feature: gene Location: 1-138 bp Feature: gene Location: 159-419 bp Feature: gene Location: 441-1898 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 996-1224 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 996-1224 bp Feature: gene Location: 2055-2378 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG10

Seq: RAYP01000040.1 (30142 bp)
Overview 1 RT 1: 21127-24280 bp Neighborhood of RT #1 [21127, 24282] RVT-DGRs Dam Feature: gene Location: 21127-21717 bp Feature: gene Location: 21805-21966 bp Feature: gene Location: 22025-23224 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 22220-22937 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 22220-22937 bp Feature: gene Location: 23196-23459 bp Feature: gene Location: 23527-24282 bp Feature: domain Description: Dam Location: 23533-24280 bp Feature: domain Description: Dam Location: 23533-24280 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, Dam (pfam05869)

Seq: RAYP01000422.1 (2655 bp)
Overview 1 RT 1: 130-1819 bp Neighborhood of RT #1 [130, 2271] RVT-UNC Feature: gene Location: 130-2271 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1582-1819 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1582-1819 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG10/RVT-UG19/RVT-GII/RVT-DGRs(RVT-UNC)

Seq: RAYP01000002.1 (271076 bp)
Overview 1 RT 1: 119358-124100 bp Neighborhood of RT #1 [119358, 124100] Glucos_trans_II RVT-UNC Feature: gene Location: 119358-121217 bp Feature: domain Description: Glucos_trans_II Location: 119859-120747 bp Feature: domain Description: Glucos_trans_II Location: 1198 59-120747 bp Feature: gene Location: 121635-121796 bp Feature: gene Location: 121870-123474 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 122308-122740 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 122308 -122740 bp Feature: gene Location: 123509-123724 bp Feature: gene Location: 123840-124100 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Glucos_trans_II (pfam14264), RVT-UG16/RVT-UG12/RVT-UG8/RVT-UG7(RVT-UNC)