myRT

myRT report for GCA_003611905.1_ASM361190v1

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Seq: RAYZ01000041.1 (37827 bp)
Overview 1 RT 1: 1243-7065 bp Neighborhood of RT #1 [1243, 7106] CENP-F_leu_zip DUF1043 RVT-GII GIIM dnaG MobA_MobL PRK13889 Feature: gene Location: 1243-2223 bp Feature: gene Location: 2383-3561 bp Feature: domain Description: CENP-F_leu_zip Location: 2713-2782 bp Feature: domain Description: CENP-F_leu_zip Location: 271 3-2782 bp Feature: domain Description: DUF1043 Location: 3055-3424 bp Feature: domain Description: DUF1 043 Location: 3055-3424 bp Feature: gene Location: 3562-4842 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3565-4150 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3565-41 50 bp Feature: domain Description: GIIM Note: maturase Location: 4207-4438 bp Feature: domain Description: GIIM Note: maturase Location: 4207-4438 bp Feature: gene Location: 4826-5485 bp Feature: domain Description: dnaG Location: 4868-5171 bp Feature: domain Description: dnaG Location: 4868-51 71 bp Feature: gene Location: 5523-7106 bp Feature: domain Description: MobA_MobL Location: 5574-6246 bp Feature: domain Description: MobA_MobL Location: 5574-6246 bp Feature: domain Description: PRK13889 Location: 6471-7065 bp Feature: domain Description: PRK1 3889 Location: 6471 -7065 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RAYZ01000002.1 (271140 bp)
Overview 1 RT 1: 9049-12858 bp Neighborhood of RT #1 [9049, 12890] DUF2809 RVT-Retrons M20_Acy1_IAAspH Feature: gene Location: 9049-9237 bp Feature: gene Location: 9282-9668 bp Feature: domain Description: DUF2809 Location: 9360-9606 bp Feature: domain Description: DUF2 809 Location: 9360-9606 bp Feature: gene Location: 9671-10861 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 10007-10583 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 10007-10583 bp Feature: gene Location: 11063-11251 bp Feature: gene Location: 11553-12890 bp Feature: domain Description: M20_Acy1_IAAspH Location: 11619-12858 bp Feature: domain Description: M2 0_Acy1_IAAspH Location: 11619-12 858 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RAYZ01000035.1 (50917 bp)
Overview 1 RT 1: 5289-10177 bp Neighborhood of RT #1 [5289, 10218] CcmA RVT-GII LPD16 NT_KNTase_like TTRAP Feature: gene Location: 5289-6134 bp Feature: gene Location: 6131-6775 bp Feature: domain Description: CcmA Location: 6149-6764 bp Feature: domain Description: CcmA Location: 6149-6764 bp Feature: gene Location: 7472-8635 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7736-8567 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 773 6-8567 bp Feature: gene Location: 8699-9982 bp Feature: domain Description: LPD16 Location: 8705-8825 bp Feature: domain Description: LPD16 Location: 8705-8825 bp Feature: domain Description: NT_KNTase_like Location: 9029-9230 bp Feature: domain Description: NT_KNTase_like Location: 9029-923 0 bp Feature: gene Location: 9982-10218 bp Feature: domain Description: TTRAP Location: 9994-10177 bp Feature: domain Description: TTRAP Location: 9994-10177 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RAYZ01000004.1 (202556 bp)
Overview 1 RT 1: 12081-23056 bp Neighborhood of RT #1 [12081, 23056] RVT-GII Intron_maturas2 VirB4_CagE VirB4_CagE LPD26 SpoVG RVT-GII Intron_maturas2 HNHc Feature: gene Location: 12081-12773 bp Feature: gene Location: 12880-13152 bp Feature: gene Location: 13276-15066 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13543-14356 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1354 3-14 356 bp Feature: domain Description: Intron_maturas2 Location: 14440-14737 bp Feature: domain Description: Intron_maturas2 Location: 14 4 4 0-14 737 bp Feature: gene Location: 15595-17811 bp Feature: domain Description: VirB4_CagE Location: 15754-16075 bp Feature: domain Description: VirB4 _CagE Location: 15754 -16075 bp Feature: domain Description: VirB4_CagE Location: 16435-17773 bp Feature: domain Description: VirB4 _CagE Location: 164 35-17773 bp Feature: gene Location: 17594-18085 bp Feature: gene Location: 18846-19547 bp Feature: domain Description: LPD26 Location: 18882-19044 bp Feature: domain Description: LPD26 Location: 18882-1904 4 bp Feature: domain Description: SpoVG Location: 19149-19386 bp Feature: domain Description: SpoVG Location: 1914 9-19386 bp Feature: gene Location: 19602-19904 bp Feature: gene Location: 19980-21812 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20244-21075 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2024 4 -21075 bp Feature: domain Description: Intron_maturas2 Location: 21147-21462 bp Feature: domain Description: Intron_maturas2 Location: 2114 7-214 62 bp Feature: domain Description: HNHc Note: nucleases Location: 21609-21783 bp Feature: domain Description: HNHc Note: nucleases Location: 21609-21783 bp Feature: gene Location: 22058-22273 bp Feature: gene Location: 22388-23056 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RAYZ01000071.1 (14589 bp)
Overview 1 RT 1: 2431-8037 bp Neighborhood of RT #1 [2431, 8159] UPF0167 XerD Phage_int_SAM_4 INT_RitC_C_like RVT-GII rSAM_six_Cys Feature: gene Location: 2431-2955 bp Feature: domain Description: UPF0167 Location: 2446-2950 bp Feature: domain Description: UPF0167 Location: 2446-295 0 bp Feature: gene Location: 3266-4858 bp Feature: domain Description: XerD Location: 3716-3878 bp Feature: domain Description: XerD Location: 3716-3878 bp Feature: domain Description: Phage_int_SAM_4 Location: 3893-4118 bp Feature: domain Description: Phage_int_SAM_4 Location: 3893-4118 bp Feature: domain Description: INT_RitC_C_like Location: 4211-4775 bp Feature: domain Description: INT_RitC_C_like Location: 4211-4775 bp Feature: gene Location: 4879-5343 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4999-5179 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4999-5 179 bp Feature: gene Location: 5479-6033 bp Feature: gene Location: 6108-8159 bp Feature: domain Description: rSAM_six_Cys Location: 6858-8037 bp Feature: domain Description: rSAM_six_Cys Location: 685 8-8037 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT