myRT

myRT report for GCA_003611985.1_ASM361198v1

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Seq: RAWX01000004.1 (371935 bp)
Overview 1 RT 1: 368496-371655 bp Neighborhood of RT #1 [368496, 371655] PRK15211 RVT-UG4 Feature: gene Location: 368496-369188 bp Feature: domain Description: PRK15211 Location: 368511-369186 bp Feature: domain Description: PRK1 521 1 Location: 36851 1 -3691 86 bp Feature: gene Location: 369175-369711 bp Feature: gene Location: 369728-370585 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 370094-370373 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 370094-370373 bp Feature: gene Location: 370799-371089 bp Feature: gene Location: 371062-371655 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15211 (fimbrial chaperone), RVT-UG4

Seq: RAWX01000003.1 (1025620 bp)
Overview 1 RT 1: 7234-11882 bp Neighborhood of RT #1 [7234, 11887] PinE RVT_N RVT-GII GIIM HNHc LGT_LGT_LGT_TIGR03299 Feature: gene Location: 7234-7569 bp Feature: gene Location: 7640-8191 bp Feature: domain Description: PinE Location: 7643-8174 bp Feature: domain Description: PinE Location: 7643-8174 bp Feature: gene Location: 8736-10424 bp Feature: domain Description: RVT_N Location: 8784-9027 bp Feature: domain Description: RVT_N Location: 8784-902 7 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9072-9720 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9072 -972 0 bp Feature: domain Description: GIIM Note: maturase Location: 9771-10005 bp Feature: domain Description: GIIM Note: maturase Location: 9771-10005 bp Feature: domain Description: HNHc Note: nucleases Location: 10245-10389 bp Feature: domain Description: HNHc Note: nucleases Location: 102 45-10389 bp Feature: gene Location: 10741-10995 bp Feature: gene Location: 11024-11887 bp Feature: domain Description: LGT_LGT_LGT_TIGR03299 Location: 11042-11882 bp Feature: domain Description: LGT_LGT_LGT_TIGR032 99 Location: 11042 -11882 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), LGT_LGT_LGT_TIGR03299

Seq: RAWX01000002.1 (1334815 bp)
Overview 1 RT 1: 565809-572415 bp 2 RT 2: 870723-873810 bp Neighborhood of RT #1 [565809, 572415] PinE RVT_N RVT-GII GIIM HNHc LGT_LGT_LGT_TIGR03299 Neighborhood of RT #2 [870723, 873812] RVT-UG4 PRK15211 Feature: gene Location: 565809-566144 bp Feature: gene Location: 566215-566766 bp Feature: domain Description: PinE Location: 566218-566749 bp Feature: domain Description: PinE Location: 566218-566749 bp Feature: gene Location: 567311-568999 bp Feature: domain Description: RVT_N Location: 567359-567602 bp Feature: domain Description: RVT_N Location: 5673 59-567602 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 567647-568295 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 567647-568295 bp Feature: domain Description: GIIM Note: maturase Location: 568346-568580 bp Feature: domain Description: GIIM Note: maturase Location: 5683 46-568580 bp Feature: domain Description: HNHc Note: nucleases Location: 568820-568964 bp Feature: domain Description: HNHc Note: nucleases Location: 568820-568964 bp Feature: gene Location: 569513-570343 bp Feature: domain Description: LGT_LGT_LGT_TIGR03299 Location: 569531-570335 bp Feature: domain Description: LGT_LGT_LGT_TIGR03 299 Location: 56953 1-5703 3 5 bp Feature: gene Location: 570523-572415 bp Feature: gene Location: 870723-871409 bp Feature: gene Location: 871289-871579 bp Feature: gene Location: 871576-872580 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 871942-872392 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 871942-8723 92 bp Feature: gene Location: 872597-873085 bp Feature: gene Location: 873120-873812 bp Feature: domain Description: PRK15211 Location: 873135-873810 bp Feature: domain Description: PRK15211 Location: 873 13 5-873 810 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), LGT_LGT_LGT_TIGR03299, RVT-UG4, PRK15211 (fimbrial chaperone)