myRT

myRT report for GCA_003612565.1_ASM361256v1

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Seq: RAZG01000062.1 (19941 bp)
Overview 1 RT 1: 23-5500 bp Neighborhood of RT #1 [23, 5613] TraC-F-type RVT-GII HNHc PrgI Feature: gene Location: 23-1468 bp Feature: domain Description: TraC-F-type Location: 56-1310 bp Feature: domain Description: TraC-F-type Location: 56-1 31 0 bp Feature: gene Location: 1559-3532 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1895-2633 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 895-2633 bp Feature: domain Description: HNHc Note: nucleases Location: 3188-3326 bp Feature: domain Description: HNHc Note: nucleases Location: 31 88-3326 bp Feature: gene Location: 4257-5258 bp Feature: gene Location: 5209-5613 bp Feature: domain Description: PrgI Location: 5230-5500 bp Feature: domain Description: PrgI Location: 5230-5500 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RAZG01000167.1 (2443 bp)
Overview 1 RT 1: 155-2010 bp Neighborhood of RT #1 [155, 2327] RVT-GII Intron_maturas2 Feature: gene Location: 155-343 bp Feature: gene Location: 377-517 bp Feature: gene Location: 516-2327 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 780-1611 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 780-1611 bp Feature: domain Description: Intron_maturas2 Location: 1680-2010 bp Feature: domain Description: Intron_maturas2 Location: 1680-2 010 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RAZG01000001.1 (190206 bp)
Overview 1 RT 1: 80638-83782 bp Neighborhood of RT #1 [80638, 83782] RVT-DGRs Avd_like Feature: gene Location: 80638-80949 bp Feature: gene Location: 80982-81266 bp Feature: gene Location: 81281-82318 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 81491-82091 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 81491-82091 bp Feature: gene Location: 82542-82910 bp Feature: domain Description: Avd_like Location: 82566-82896 bp Feature: domain Description: Avd_like Location: 82566-82896 bp Feature: gene Location: 83012-83782 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RAZG01000007.1 (124420 bp)
Overview 1 RT 1: 82922-86504 bp 2 RT 2: 120241-124257 bp Neighborhood of RT #1 [82922, 86611] Avd_like RVT-DGRs SdhC Neighborhood of RT #2 [120241, 124268] VirD4 RVT-GII T4SS-DNA_transf Feature: gene Location: 82922-83968 bp Feature: gene Location: 84044-84460 bp Feature: domain Description: Avd_like Location: 84110-84434 bp Feature: domain Description: Avd_like Location: 84 110-84 4 34 bp Feature: gene Location: 84828-85904 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 85038-85701 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 85038-85701 bp Feature: gene Location: 85910-86221 bp Feature: gene Location: 86237-86611 bp Feature: domain Description: SdhC Location: 86249-86504 bp Feature: domain Description: SdhC Location: 8624 9-86504 bp Feature: gene Location: 120241-120996 bp Feature: domain Description: VirD4 Location: 120541-120931 bp Feature: domain Description: VirD4 Location: 12054 1-120931 bp Feature: gene Location: 121307-121630 bp Feature: gene Location: 121618-123507 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 121936-122680 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 121936-122680 bp Feature: gene Location: 123530-123667 bp Feature: gene Location: 123678-124268 bp Feature: domain Description: T4SS-DNA_transf Location: 123690-124257 bp Feature: domain Description: T4 SS-DNA_transf Location: 123690-124 257 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RAZG01000081.1 (11115 bp)
Overview 1 RT 1: 36-4591 bp Neighborhood of RT #1 [36, 4677] RVT-GII XerD Phage_int_SAM_5 INT_RitC_C_like Feature: gene Location: 36-458 bp Feature: gene Location: 569-790 bp Feature: gene Location: 863-1969 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1178-1910 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1178-1910 bp Feature: gene Location: 2169-3674 bp Feature: domain Description: XerD Location: 3276-3648 bp Feature: domain Description: XerD Location: 3276-3648 bp Feature: gene Location: 3814-4677 bp Feature: domain Description: Phage_int_SAM_5 Location: 3820-3955 bp Feature: domain Description: Phage_int_SAM_5 Location: 3820-395 5 bp Feature: domain Description: INT_RitC_C_like Location: 4057-4591 bp Feature: domain Description: INT_RitC_C_like Location: 405 7-45 91 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT