myRT

myRT report for GCA_003612655.1_ASM361265v1

Download annotations/find similar RTs

Seq: RAZK01000038.1 (56451 bp)
Overview 1 RT 1: 7486-11634 bp Neighborhood of RT #1 [7486, 11918] RVT-DGRs pfam12571 Feature: gene Location: 7486-7755 bp Feature: gene Location: 7987-8166 bp Feature: gene Location: 8389-9621 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 8686-9304 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 8686-9304 bp Feature: gene Location: 10027-11316 bp Feature: gene Location: 11316-11918 bp Feature: domain Description: pfam12571 Location: 11340-11634 bp Feature: domain Description: pfam1 2571 Location: 1 1 340-1 1 634 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, pfam12571 (DUF3751;Phage tail-collar fibre protein)

Seq: RAZK01000057.1 (34942 bp)
Overview 1 RT 1: 26325-29458 bp Neighborhood of RT #1 [26325, 29469] Tn916-Xis FtsK RVT-GII GIIM TnaA TnaA Feature: gene Location: 26325-26543 bp Feature: domain Description: Tn916-Xis Location: 26352-26541 bp Feature: domain Description: Tn916-Xis Location: 2 6352 -2 6541 bp Feature: gene Location: 26774-27670 bp Feature: domain Description: FtsK Location: 27212-27644 bp Feature: domain Description: FtsK Location: 2 72 12 -2 7644 bp Feature: gene Location: 27648-28295 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27654-27750 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 7654-2 7750 bp Feature: domain Description: GIIM Note: maturase Location: 27804-28035 bp Feature: domain Description: GIIM Note: maturase Location: 2 7804-2 8035 bp Feature: gene Location: 28753-28908 bp Feature: domain Description: TnaA Location: 28756-28876 bp Feature: domain Description: TnaA Location: 2 8756-2 8876 bp Feature: gene Location: 28915-29469 bp Feature: domain Description: TnaA Location: 29044-29458 bp Feature: domain Description: TnaA Location: 2 9044-2 9458 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tn916-Xis (pfam09035), FtsK (COG1674), RVT-GII, GIIM (pfam08388), TnaA (COG3033)

Seq: RAZK01000363.1 (825 bp)
Overview 1 RT 1: 1-823 bp Neighborhood of RT #1 [1, 822] RVT-GII Feature: gene Location: 1-822 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 139-823 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 9-823 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: RAZK01000239.1 (2615 bp)
Overview 1 RT 1: 125-2476 bp Neighborhood of RT #1 [125, 2476] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 125-1918 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 392-1208 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 392-1208 bp Feature: domain Description: Intron_maturas2 Location: 1286-1577 bp Feature: domain Description: Intron_maturas2 Location: 1286-1577 bp Feature: domain Description: HNHc Note: nucleases Location: 1745-1898 bp Feature: domain Description: HNHc Note: nucleases Location: 174 5-1898 bp Feature: gene Location: 1994-2191 bp Feature: gene Location: 2318-2476 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: RAZK01000027.1 (74402 bp)
Overview 1 RT 1: 57982-60561 bp Neighborhood of RT #1 [57982, 60572] Phage_XkdX RVT-DGRs SH3_and_anchor Phage_holin_Dp1 Feature: gene Location: 57982-58122 bp Feature: domain Description: Phage_XkdX Location: 58003-58120 bp Feature: domain Description: Phage_XkdX Location: 5 8003-5 8120 bp Feature: gene Location: 58209-58613 bp Feature: gene Location: 58816-60012 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 59011-59734 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 5 9011-5 9734 bp Feature: gene Location: 60019-60351 bp Feature: domain Description: SH3_and_anchor Location: 60052-60337 bp Feature: domain Description: SH3_and_anchor Location: 6005 2-60337 bp Feature: gene Location: 60366-60572 bp Feature: domain Description: Phage_holin_Dp1 Location: 60375-60561 bp Feature: domain Description: Phage_holin_Dp1 Location: 60375 -605 61 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_XkdX (pfam09693), RVT-DGRs, SH3_and_anchor (TIGR04211), Phage_holin_Dp1 (pfam16938)

Seq: RAZK01000039.1 (55323 bp)
Overview 1 RT 1: 26070-30512 bp Neighborhood of RT #1 [26070, 30532] TraG-D_C RVT-GII HNHc T4SS-DNA_transf Feature: gene Location: 26070-26324 bp Feature: gene Location: 26349-27065 bp Feature: domain Description: TraG-D_C Location: 26499-26853 bp Feature: domain Description: TraG-D_C Location: 26 499-26 853 bp Feature: gene Location: 27223-29127 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27538-28270 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27538-28270 bp Feature: domain Description: HNHc Note: nucleases Location: 28849-29017 bp Feature: domain Description: HNHc Note: nucleases Location: 28849-29017 bp Feature: gene Location: 29206-29421 bp Feature: gene Location: 29876-30532 bp Feature: domain Description: T4SS-DNA_transf Location: 29918-30512 bp Feature: domain Description: T4SS-DNA_transf Location: 29918-30512 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TraG-D_C (pfam12696), RVT-GII, HNHc (smart00507), T4SS-DNA_transf (pfam02534)