myRT

myRT report for GCA_003628265.1_ASM362826v1

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Seq: RCAM01000117.1 (9112 bp)
Overview 1 RT 1: 398-3573 bp Neighborhood of RT #1 [398, 3573] GIIM HNHc RVT_N RVT-GII Feature: gene Location: 398-733 bp Feature: gene Location: 848-1516 bp Feature: domain Description: GIIM Note: maturase Location: 878-1112 bp Feature: domain Description: GIIM Note: maturase Location: 878-1 1 1 2 bp Feature: domain Description: HNHc Note: nucleases Location: 1322-1481 bp Feature: domain Description: HNHc Note: nucleases Location: 1 322-1 481 bp Feature: gene Location: 1567-2514 bp Feature: domain Description: RVT_N Location: 1615-1852 bp Feature: domain Description: RVT_N Location: 1 61 5-1 852 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1903-2503 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 903-2503 bp Feature: gene Location: 2794-2976 bp Feature: gene Location: 3238-3573 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GIIM (pfam08388), HNHc (smart00507), RVT_N (pfam13655), RVT-GII

Seq: RCAM01000004.1 (163309 bp)
Overview 1 RT 1: 28837-35080 bp Neighborhood of RT #1 [28837, 35217] Phage_integrase RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 28837-29103 bp Feature: domain Description: Phage_integrase Location: 28903-28999 bp Feature: domain Description: Phage_integrase Location: 2 8903-2 8999 bp Feature: gene Location: 29186-29656 bp Feature: gene Location: 30003-33212 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 30531-31020 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 30531-3102 0 bp Feature: domain Description: nitrilase Location: 32526-33123 bp Feature: domain Description: nitrilase Location: 32 52 6-3312 3 bp Feature: gene Location: 33507-34310 bp Feature: domain Description: AbiEi_3_N Location: 33540-33801 bp Feature: domain Description: AbiEi_3_N Location: 33540-33801 bp Feature: domain Description: AbiEi_3 Location: 33813-34269 bp Feature: domain Description: AbiEi_3 Location: 33813-342 69 bp Feature: gene Location: 34297-35217 bp Feature: domain Description: AbiEii Location: 34339-35080 bp Feature: domain Description: AbiEii Location: 34339-35080 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_integrase (pfam00589), RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)