myRT

myRT report for GCA_003630175.1_ASM363017v1

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Seq: RADM01000002.1 (208489 bp)
Overview 1 RT 1: 190236-197383 bp Neighborhood of RT #1 [190236, 197547] STN TonB-siderophor YHI9 RVT-UG2 PRK06333 HxlR Feature: gene Location: 190236-192638 bp Feature: domain Description: STN Location: 190356-190509 bp Feature: domain Description: STN Location: 1 90356-1 90509 bp Feature: domain Description: TonB-siderophor Location: 190617-192576 bp Feature: domain Description: TonB-siderophor Location: 1 9061 7-1 92576 bp Feature: gene Location: 192799-193635 bp Feature: domain Description: YHI9 Location: 192811-193627 bp Feature: domain Description: YHI9 Location: 1 9281 1 -1 93627 bp Feature: gene Location: 193819-195165 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 194068-194854 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 1 94068-1 94854 bp Feature: gene Location: 195664-196932 bp Feature: domain Description: PRK06333 Location: 195670-196927 bp Feature: domain Description: PRK06333 Location: 1 95670-1 96927 bp Feature: gene Location: 197041-197547 bp Feature: domain Description: HxlR Location: 197065-197383 bp Feature: domain Description: HxlR Location: 1 97065-1 97383 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT STN (smart00965), TonB-siderophor (TIGR01783), YHI9 (COG0384), RVT-UG2, PRK06333 (beta-ketoacyl-ACP synthase), HxlR (pfam01638)

Seq: RADM01000077.1 (4549 bp)
Overview 1 RT 1: 2-2980 bp Neighborhood of RT #1 [2, 2980] DUF772 RVT-GII GIIM Feature: gene Location: 2-412 bp Feature: domain Description: DUF772 Location: 5-116 bp Feature: domain Description: DUF772 Location: 5-116 bp Feature: gene Location: 801-2069 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1014-1671 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1014-1671 bp Feature: domain Description: GIIM Note: maturase Location: 1749-1971 bp Feature: domain Description: GIIM Note: maturase Location: 1749-1971 bp Feature: gene Location: 2219-2617 bp Feature: gene Location: 2801-2980 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF772 (pfam05598), RVT-GII, GIIM (pfam08388)

Seq: RADM01000092.1 (367120 bp)
Overview 1 RT 1: 240868-247001 bp Neighborhood of RT #1 [240868, 247009] groES groEL RVT-GII GIIM HNHc COG4318 PRK14196 Feature: gene Location: 240868-241161 bp Feature: domain Description: groES Location: 240871-241156 bp Feature: domain Description: groES Location: 240871-241156 bp Feature: gene Location: 241212-242855 bp Feature: domain Description: groEL Location: 241218-242835 bp Feature: domain Description: groEL Location: 241218-24283 5 bp Feature: gene Location: 244274-245581 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 244277-244877 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 244277-244877 bp Feature: domain Description: GIIM Note: maturase Location: 244928-245162 bp Feature: domain Description: GIIM Note: maturase Location: 244928-245162 bp Feature: domain Description: HNHc Note: nucleases Location: 245381-245534 bp Feature: domain Description: HNHc Note: nucleases Location: 2453 81-24553 4 bp Feature: gene Location: 245711-246397 bp Feature: domain Description: COG4318 Location: 245729-246395 bp Feature: domain Description: COG43 18 Location: 245729-2463 95 bp Feature: gene Location: 246626-247009 bp Feature: domain Description: PRK14196 Location: 246629-247001 bp Feature: domain Description: PRK14196 Location: 246629-247001 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT groES (PRK14533), groEL (PRK12852), RVT-GII, GIIM (pfam08388), HNHc (smart00507), COG4318 (Uncharacterized protein ), PRK14196 (fluoride efflux transporter CrcB)

Seq: RADM01000060.1 (99683 bp)
Overview 1 RT 1: 45181-51152 bp Neighborhood of RT #1 [45181, 51157] PRK00024 RVT_N RVT-GII GIIM HNHc PRK05579 dut Feature: gene Location: 45181-45729 bp Feature: gene Location: 45746-46420 bp Feature: domain Description: PRK00024 Location: 45749-46418 bp Feature: domain Description: PRK00024 Location: 4 574 9-4 64 18 bp Feature: gene Location: 47592-49274 bp Feature: domain Description: RVT_N Location: 47601-47844 bp Feature: domain Description: RVT_N Location: 4 7601-4 784 4 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 47892-48543 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 7892-4 854 3 bp Feature: domain Description: GIIM Note: maturase Location: 48621-48849 bp Feature: domain Description: GIIM Note: maturase Location: 4 8621-4 884 9 bp Feature: domain Description: HNHc Note: nucleases Location: 49077-49233 bp Feature: domain Description: HNHc Note: nucleases Location: 4 9077-4 9233 bp Feature: gene Location: 49486-50694 bp Feature: domain Description: PRK05579 Location: 49492-50686 bp Feature: domain Description: PRK05579 Location: 4 94 92-50686 bp Feature: gene Location: 50702-51157 bp Feature: domain Description: dut Location: 50708-51152 bp Feature: domain Description: dut Location: 50708-51152 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK00024 (DNA repair protein RadC), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), PRK05579 (bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated), dut (TIGR00576)