myRT

myRT report for GCA_003630185.1_ASM363018v1

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Seq: RADL01000344.1 (8884 bp)
Overview 1 RT 1: 579-6555 bp Neighborhood of RT #1 [579, 6555] dut PRK05579 RVT_N RVT-GII GIIM HNHc PRK00024 Feature: gene Location: 579-1034 bp Feature: domain Description: dut Location: 585-1029 bp Feature: domain Description: dut Location: 585-1 029 bp Feature: gene Location: 1042-2250 bp Feature: domain Description: PRK05579 Location: 1048-2242 bp Feature: domain Description: PRK05579 Location: 1 048-2242 bp Feature: gene Location: 2462-4144 bp Feature: domain Description: RVT_N Location: 2471-2714 bp Feature: domain Description: RVT_N Location: 2471 -271 4 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2762-3413 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2762-341 3 bp Feature: domain Description: GIIM Note: maturase Location: 3491-3719 bp Feature: domain Description: GIIM Note: maturase Location: 3491 -371 9 bp Feature: domain Description: HNHc Note: nucleases Location: 3947-4103 bp Feature: domain Description: HNHc Note: nucleases Location: 3947-41 03 bp Feature: gene Location: 5316-5990 bp Feature: domain Description: PRK00024 Location: 5319-5988 bp Feature: domain Description: PRK00024 Location: 531 9-5988 bp Feature: gene Location: 6007-6555 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), PRK05579 (bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), PRK00024 (DNA repair protein RadC)

Seq: RADL01000021.1 (23434 bp)
Overview 1 RT 1: 16803-22936 bp Neighborhood of RT #1 [16803, 22944] groES groEL RVT_N RVT-GII GIIM HNHc COG4318 PRK14196 Feature: gene Location: 16803-17096 bp Feature: domain Description: groES Location: 16806-17091 bp Feature: domain Description: groES Location: 16806-17091 bp Feature: gene Location: 17147-18790 bp Feature: domain Description: groEL Location: 17153-18770 bp Feature: domain Description: groEL Location: 17153-18770 bp Feature: gene Location: 19825-21516 bp Feature: domain Description: RVT_N Location: 19879-20119 bp Feature: domain Description: RVT_N Location: 19879-2 0119 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20167-20812 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 0167-2 0812 bp Feature: domain Description: GIIM Note: maturase Location: 20863-21097 bp Feature: domain Description: GIIM Note: maturase Location: 2 0863-2 1097 bp Feature: domain Description: HNHc Note: nucleases Location: 21316-21469 bp Feature: domain Description: HNHc Note: nucleases Location: 2 1316-2 1469 bp Feature: gene Location: 21646-22332 bp Feature: domain Description: COG4318 Location: 21664-22330 bp Feature: domain Description: COG4318 Location: 2 1664-2 2 330 bp Feature: gene Location: 22561-22944 bp Feature: domain Description: PRK14196 Location: 22564-22936 bp Feature: domain Description: PRK14196 Location: 2 2 564-2 2 936 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT groES (PRK14533), groEL (PRK12852), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), COG4318 (Uncharacterized protein ), PRK14196 (fluoride efflux transporter CrcB)

Seq: RADL01000053.1 (13464 bp)
Overview 1 RT 1: 10485-13463 bp Neighborhood of RT #1 [10485, 13463] RVT-GII GIIM Feature: gene Location: 10485-10664 bp Feature: gene Location: 10848-11246 bp Feature: gene Location: 11396-12664 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11609-12266 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11609-12266 bp Feature: domain Description: GIIM Note: maturase Location: 12344-12566 bp Feature: domain Description: GIIM Note: maturase Location: 123 44-12566 bp Feature: gene Location: 13227-13463 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: RADL01000568.1 (74813 bp)
Overview 1 RT 1: 51205-58454 bp Neighborhood of RT #1 [51205, 58516] HxlR PRK06333 RVT-UG2 YHI9 STN TonB-siderophor Feature: gene Location: 51205-51711 bp Feature: domain Description: HxlR Location: 51229-51547 bp Feature: domain Description: HxlR Location: 51229-5154 7 bp Feature: gene Location: 51820-53088 bp Feature: domain Description: PRK06333 Location: 51826-53083 bp Feature: domain Description: PRK06333 Location: 51826-53083 bp Feature: gene Location: 53587-54933 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 53836-54622 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 53836-54 622 bp Feature: gene Location: 55117-55953 bp Feature: domain Description: YHI9 Location: 55129-55945 bp Feature: domain Description: YHI9 Location: 55129-5594 5 bp Feature: gene Location: 56114-58516 bp Feature: domain Description: STN Location: 56234-56387 bp Feature: domain Description: STN Location: 56234 -56387 bp Feature: domain Description: TonB-siderophor Location: 56495-58454 bp Feature: domain Description: TonB-siderophor Location: 564 95-584 54 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HxlR (pfam01638), PRK06333 (beta-ketoacyl-ACP synthase), RVT-UG2, YHI9 (COG0384), STN (smart00965), TonB-siderophor (TIGR01783)