myRT

myRT report for GCA_003630635.1_ASM363063v1

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Seq: RACO01000119.1 (37930 bp)
Overview 1 RT 1: 1-2958 bp Neighborhood of RT #1 [1, 2958] RVT-GII GIIM Feature: gene Location: 1-243 bp Feature: gene Location: 779-2047 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 992-1649 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 992-1 649 bp Feature: domain Description: GIIM Note: maturase Location: 1727-1949 bp Feature: domain Description: GIIM Note: maturase Location: 1 727-1 949 bp Feature: gene Location: 2197-2595 bp Feature: gene Location: 2779-2958 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: RACO01000071.1 (279340 bp)
Overview 1 RT 1: 49403-58262 bp Neighborhood of RT #1 [49403, 58270] NTP_transferase_like_1 COG3178 RVT_N RVT-GII YkfC HNH LptD PRK10770 Feature: gene Location: 49403-50077 bp Feature: domain Description: NTP_transferase_like_1 Location: 49409-50048 bp Feature: domain Description: NTP_transferase_like_1 Location: 49409-50048 bp Feature: gene Location: 50074-51090 bp Feature: domain Description: COG3178 Location: 50077-51076 bp Feature: domain Description: COG3178 Location: 50077-51076 bp Feature: gene Location: 52363-54075 bp Feature: domain Description: RVT_N Location: 52420-52663 bp Feature: domain Description: RVT_N Location: 52 42 0-52 663 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52708-53344 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52 708-53344 bp Feature: domain Description: YkfC Location: 53554-53704 bp Feature: domain Description: YkfC Location: 53554-53704 bp Feature: domain Description: HNH Note: nucleases Location: 53881-54019 bp Feature: domain Description: HNH Note: nucleases Location: 53881-54019 bp Feature: gene Location: 54208-56997 bp Feature: domain Description: LptD Location: 54403-56983 bp Feature: domain Description: LptD Location: 54403-56983 bp Feature: gene Location: 57056-58270 bp Feature: domain Description: PRK10770 Location: 57068-58262 bp Feature: domain Description: PRK10770 Location: 57068-582 62 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NTP_transferase_like_1 (cd06422), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), LptD (COG1452), PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional)

Seq: RACO01000107.1 (72440 bp)
Overview 1 RT 1: 20889-24618 bp Neighborhood of RT #1 [20889, 24618] SLATT_5 RVT-UG17 Feature: gene Location: 20889-21023 bp Feature: gene Location: 21761-22303 bp Feature: domain Description: SLATT_5 Location: 21767-22277 bp Feature: domain Description: SLATT_5 Location: 21767-22277 bp Feature: gene Location: 22300-23664 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 22528-23131 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 22528-23 13 1 bp Feature: gene Location: 23706-24176 bp Feature: gene Location: 24193-24618 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17