myRT

myRT report for GCA_003630665.1_ASM363066v1

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Seq: RACN01000114.1 (15895 bp)
Overview 1 RT 1: 5521-10960 bp Neighborhood of RT #1 [5521, 10962] DUF932 RVT-UG8 RadC Feature: gene Location: 5521-6348 bp Feature: domain Description: DUF932 Location: 5632-6313 bp Feature: domain Description: DUF932 Location: 5632-631 3 bp Feature: gene Location: 6380-6577 bp Feature: gene Location: 8253-10208 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 8775-9216 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 8775-921 6 bp Feature: gene Location: 10256-10387 bp Feature: gene Location: 10453-10962 bp Feature: domain Description: RadC Location: 10504-10960 bp Feature: domain Description: RadC Location: 1 0504-1 0960 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF932 (pfam06067), RVT-UG8, RadC (pfam04002)

Seq: RACN01000238.1 (41085 bp)
Overview 1 RT 1: 9730-13850 bp Neighborhood of RT #1 [9730, 13850] SLATT_5 RVT-UG17 Feature: gene Location: 9730-10632 bp Feature: gene Location: 10993-11535 bp Feature: domain Description: SLATT_5 Location: 10999-11509 bp Feature: domain Description: SLATT_5 Location: 10999-11509 bp Feature: gene Location: 11532-12896 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 11760-12363 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 11760-12 363 bp Feature: gene Location: 12938-13408 bp Feature: gene Location: 13425-13850 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17

Seq: RACN01000132.1 (76069 bp)
Overview 1 RT 1: 51858-60046 bp Neighborhood of RT #1 [51858, 60054] COG3178 RVT_N RVT-GII YkfC HNH LptD PRK10770 Feature: gene Location: 51858-52874 bp Feature: domain Description: COG3178 Location: 51861-52860 bp Feature: domain Description: COG3 178 Location: 51861-52860 bp Feature: gene Location: 53171-53305 bp Feature: gene Location: 54147-55859 bp Feature: domain Description: RVT_N Location: 54204-54447 bp Feature: domain Description: RVT_N Location: 54204-54447 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54492-55128 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 54492-55128 bp Feature: domain Description: YkfC Location: 55338-55488 bp Feature: domain Description: YkfC Location: 553 3 8-55488 bp Feature: domain Description: HNH Note: nucleases Location: 55665-55803 bp Feature: domain Description: HNH Note: nucleases Location: 55665-55803 bp Feature: gene Location: 55992-58781 bp Feature: domain Description: LptD Location: 56187-58767 bp Feature: domain Description: LptD Location: 56187-58767 bp Feature: gene Location: 58840-60054 bp Feature: domain Description: PRK10770 Location: 58852-60046 bp Feature: domain Description: PRK10770 Location: 58852-60046 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), LptD (COG1452), PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional)

Seq: RACN01000252.1 (9054 bp)
Overview 1 RT 1: 274-8735 bp Neighborhood of RT #1 [274, 8737] RVT_N RVT-GII GIIM HNH PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 PRK05658 Feature: gene Location: 274-1959 bp Feature: domain Description: RVT_N Location: 331-571 bp Feature: domain Description: RVT_N Location: 331-571 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 619-1255 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 619-1255 bp Feature: domain Description: GIIM Note: maturase Location: 1309-1540 bp Feature: domain Description: GIIM Note: maturase Location: 1309-154 0 bp Feature: domain Description: HNH Note: nucleases Location: 1792-1930 bp Feature: domain Description: HNH Note: nucleases Location: 1792-1930 bp Feature: gene Location: 3040-6777 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 3148-3805 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 314 8-3805 bp Feature: domain Description: PRK09776 Location: 4018-4489 bp Feature: domain Description: PRK09776 Location: 4 018-4 4 89 bp Feature: domain Description: PAS Location: 4579-5071 bp Feature: domain Description: PAS Location: 4 579-5071 bp Feature: domain Description: PRK10060 Location: 5080-6727 bp Feature: domain Description: PRK10060 Location: 5080-6727 bp Feature: gene Location: 6884-8737 bp Feature: domain Description: PRK05658 Location: 6896-8735 bp Feature: domain Description: PRK05658 Location: 6896-8735 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), PBP2_BvgS_HisK_like (cd01007), PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), PRK05658 (RNA polymerase sigma factor RpoD; Validated)

Seq: RACN01000050.1 (14410 bp)
Overview 1 RT 1: 3-3855 bp Neighborhood of RT #1 [3, 3938] RVT-GII GIIM DUF772 ABC_phnC Feature: gene Location: 3-320 bp Feature: gene Location: 470-1738 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 683-1340 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 683-1340 bp Feature: domain Description: GIIM Note: maturase Location: 1418-1640 bp Feature: domain Description: GIIM Note: maturase Location: 1418-1640 bp Feature: gene Location: 2127-2768 bp Feature: domain Description: DUF772 Location: 2277-2472 bp Feature: domain Description: DUF772 Location: 2277-2472 bp Feature: gene Location: 3111-3938 bp Feature: domain Description: ABC_phnC Location: 3141-3855 bp Feature: domain Description: ABC_phnC Location: 3141-385 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DUF772 (pfam05598), ABC_phnC (TIGR02315)