myRT

myRT report for GCA_003633615.1_ASM363361v1

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Seq: RBKU01000001.1 (6660733 bp)
Overview 1 RT 1: 814671-820041 bp 2 RT 2: 862425-866739 bp 3 RT 3: 1256950-1258874 bp 4 RT 4: 2950047-2954334 bp 5 RT 5: 4905315-4910702 bp 6 RT 6: 5396051-5402736 bp Neighborhood of RT #1 [814671, 820041] FecR RVT_N RVT-GII GIIM McrA Neighborhood of RT #2 [862425, 866753] Bac_Flav_CT_J RVT-GII Intron_maturas2 HNHc Bac_Flav_CT_J Bac_Flav_CT_K Neighborhood of RT #3 [1256950, 1258885] RVT_N RVT-GII CE2_N Endoglucanase_E_like Neighborhood of RT #4 [2950047, 2954348] Bac_Flav_CT_J RVT-GII Intron_maturas2 HNHc Bac_Flav_CT_J Bac_Flav_CT_K Neighborhood of RT #5 [4905315, 4910716] RVT-UG2 YafY Neighborhood of RT #6 [5396051, 5402741] CarboxypepD_reg CirA RVT_N RVT-GII GIIM McrA BaeS Feature: gene Location: 814671-815912 bp Feature: domain Description: FecR Location: 815181-815865 bp Feature: domain Description: FecR Location: 81 51 81 -81 5865 bp Feature: gene Location: 816018-816818 bp Feature: gene Location: 817439-819115 bp Feature: domain Description: RVT_N Location: 817472-817712 bp Feature: domain Description: RVT_N Location: 81 7472-81 771 2 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 817760-818405 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 81 7760-81 8405 bp Feature: domain Description: GIIM Note: maturase Location: 818516-818741 bp Feature: domain Description: GIIM Note: maturase Location: 81 851 6-81 8741 bp Feature: domain Description: McrA Location: 818789-819092 bp Feature: domain Description: McrA Location: 81 8789-81 9092 bp Feature: gene Location: 819261-819443 bp Feature: gene Location: 819490-820041 bp Feature: gene Location: 862425-863156 bp Feature: domain Description: Bac_Flav_CT_J Location: 862629-862959 bp Feature: domain Description: Bac_Flav_CT_J Location: 862629-862959 bp Feature: gene Location: 863478-863669 bp Feature: gene Location: 863699-865504 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 863963-864785 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 863963-864785 bp Feature: domain Description: Intron_maturas2 Location: 864854-865196 bp Feature: domain Description: Intron_maturas2 Location: 864854-8651 96 bp Feature: domain Description: HNHc Note: nucleases Location: 865325-865475 bp Feature: domain Description: HNHc Note: nucleases Location: 865325-865475 bp Feature: gene Location: 865584-866072 bp Feature: domain Description: Bac_Flav_CT_J Location: 865629-866055 bp Feature: domain Description: Bac_Flav_CT_J Location: 865629-866055 bp Feature: gene Location: 866139-866753 bp Feature: domain Description: Bac_Flav_CT_K Location: 866148-866739 bp Feature: domain Description: Bac_Flav_CT_K Location: 8661 48-866739 bp Feature: gene Location: 1256950-1257138 bp Feature: gene Location: 1257159-1257389 bp Feature: domain Description: RVT_N Location: 1257171-1257330 bp Feature: domain Description: RVT_N Location: 1 2571 71 -1 257330 bp Feature: gene Location: 1257417-1257578 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1257420-1257555 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 257420-1 257555 bp Feature: gene Location: 1257814-1257948 bp Feature: gene Location: 1257974-1258885 bp Feature: domain Description: CE2_N Location: 1258079-1258394 bp Feature: domain Description: CE2_N Location: 1 258079-1 258394 bp Feature: domain Description: Endoglucanase_E_like Location: 1258415-1258874 bp Feature: domain Description: Endoglucanase_E_like Location: 1 25841 5-1 258874 bp Feature: gene Location: 2950047-2950547 bp Feature: domain Description: Bac_Flav_CT_J Location: 2950152-2950521 bp Feature: domain Description: Bac_Flav_CT_J Location: 29501 52-2950521 bp Feature: gene Location: 2950554-2950748 bp Feature: gene Location: 2951044-2952915 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2951365-2952187 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2951 365-29521 87 bp Feature: domain Description: Intron_maturas2 Location: 2952346-2952538 bp Feature: domain Description: Intron_maturas2 Location: 2952346-2952538 bp Feature: domain Description: HNHc Note: nucleases Location: 2952724-2952886 bp Feature: domain Description: HNHc Note: nucleases Location: 2952724-2952886 bp Feature: gene Location: 2952870-2953715 bp Feature: domain Description: Bac_Flav_CT_J Location: 2953098-2953641 bp Feature: domain Description: Bac_Flav_CT_J Location: 2953098-2953641 bp Feature: gene Location: 2953725-2954348 bp Feature: domain Description: Bac_Flav_CT_K Location: 2953740-2954334 bp Feature: domain Description: Bac_Flav_CT_K Location: 2953740-2954334 bp Feature: gene Location: 4905315-4906223 bp Feature: gene Location: 4906220-4907347 bp Feature: gene Location: 4907539-4909194 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 4907860-4908802 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 4907860-4908802 bp Feature: gene Location: 4909266-4909448 bp Feature: gene Location: 4909580-4910716 bp Feature: domain Description: YafY Location: 4910474-4910702 bp Feature: domain Description: YafY Location: 491 0474-491 0702 bp Feature: gene Location: 5396051-5397604 bp Feature: domain Description: CarboxypepD_reg Location: 5396129-5396351 bp Feature: domain Description: CarboxypepD_reg Location: 53961 29-5396351 bp Feature: domain Description: CirA Location: 5396351-5397557 bp Feature: domain Description: CirA Location: 5396351 -5397557 bp Feature: gene Location: 5397920-5398336 bp Feature: gene Location: 5399011-5400687 bp Feature: domain Description: RVT_N Location: 5399044-5399284 bp Feature: domain Description: RVT_N Location: 5399044-5399284 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5399332-5399977 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5399332-5399977 bp Feature: domain Description: GIIM Note: maturase Location: 5400088-5400313 bp Feature: domain Description: GIIM Note: maturase Location: 5400088-540031 3 bp Feature: domain Description: McrA Location: 5400361-5400664 bp Feature: domain Description: McrA Location: 5400361 -5400664 bp Feature: gene Location: 5400717-5400863 bp Feature: gene Location: 5401176-5402741 bp Feature: domain Description: BaeS Location: 5401701-5402736 bp Feature: domain Description: BaeS Location: 5401 701 -5402736 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FecR (pfam04773), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), Bac_Flav_CT_J (TIGR03782), Intron_maturas2 (pfam01348), HNHc (smart00507), Bac_Flav_CT_K (TIGR03781), CE2_N (pfam17996)
Endoglucanase_E_like (cd01831), RVT-UG2, YafY (COG2378), CarboxypepD_reg (pfam13620), CirA (COG1629), BaeS (COG0642)