myRT

myRT report for GCA_003633975.1_ASM363397v1

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Seq: RBIH01000002.1 (878092 bp)
Overview 1 RT 1: 110827-118593 bp 2 RT 2: 465608-468381 bp Neighborhood of RT #1 [110827, 118593] GH16_Strep_laminarinase_like CBD_IV RVT-GII Intron_maturas2 HNHc YccC YccC Neighborhood of RT #2 [465608, 468401] RVT-GII Cupin_7 Feature: gene Location: 110827-112242 bp Feature: domain Description: GH16_Strep_laminarinase_like Location: 110974-111772 bp Feature: domain Description: GH1 6_Strep_laminarinase_like Location: 1 1 0974-1 1 1 772 bp Feature: domain Description: CBD_IV Location: 111835-112234 bp Feature: domain Description: CBD_IV Location: 1 1 1 835-1 1 2234 bp Feature: gene Location: 112538-113011 bp Feature: gene Location: 113537-115363 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 113798-114599 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 3798-1 1 4599 bp Feature: domain Description: Intron_maturas2 Location: 114716-114932 bp Feature: domain Description: Intron_maturas2 Location: 1 1 471 6-1 1 4932 bp Feature: domain Description: HNHc Note: nucleases Location: 115127-115289 bp Feature: domain Description: HNHc Note: nucleases Location: 1 1 51 27-1 1 5289 bp Feature: gene Location: 115532-117841 bp Feature: domain Description: YccC Location: 115571-116516 bp Feature: domain Description: YccC Location: 1 1 5571 -1 1 651 6 bp Feature: domain Description: YccC Location: 116690-117314 bp Feature: domain Description: YccC Location: 1 1 6690-1 1 731 4 bp Feature: gene Location: 118021-118593 bp Feature: gene Location: 465608-466075 bp Feature: gene Location: 466417-466794 bp Feature: gene Location: 466880-467506 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 466886-467459 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 466886-467459 bp Feature: gene Location: 467671-467943 bp Feature: gene Location: 468063-468401 bp Feature: domain Description: Cupin_7 Location: 468105-468381 bp Feature: domain Description: Cupin_7 Location: 4681 05-468381 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RBIH01000001.1 (11022544 bp)
Overview 1 RT 1: 186975-192881 bp 2 RT 2: 474886-478550 bp 3 RT 3: 10182512-10190601 bp Neighborhood of RT #1 [186975, 192889] LysR DUF4096 RVT-GII Intron_maturas2 HNHc DDE_Tnp_1 rocD Neighborhood of RT #2 [474886, 478627] HTH_23 HTH_33 RVT-GII GIIM Acetyltransf_3 Neighborhood of RT #3 [10182512, 10190609] HTH_LacI PBP1_uncharacterized_sugar_binding LmbE RVT-GII Intron_maturas2 HNHc Transposase_20 SufI Feature: gene Location: 186975-187976 bp Feature: domain Description: LysR Location: 187104-187965 bp Feature: domain Description: LysR Location: 187104-187965 bp Feature: gene Location: 188484-188813 bp Feature: domain Description: DUF4096 Location: 188613-188799 bp Feature: domain Description: DUF4096 Location: 188613-188799 bp Feature: gene Location: 189339-191165 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 189600-190401 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 189600-190401 bp Feature: domain Description: Intron_maturas2 Location: 190518-190734 bp Feature: domain Description: Intron_maturas2 Location: 190518-190734 bp Feature: domain Description: HNHc Note: nucleases Location: 190929-191091 bp Feature: domain Description: HNHc Note: nucleases Location: 19092 9-191091 bp Feature: gene Location: 191297-191839 bp Feature: domain Description: DDE_Tnp_1 Location: 191333-191777 bp Feature: domain Description: DDE_Tnp_1 Location: 191333-191777 bp Feature: gene Location: 192761-192889 bp Feature: domain Description: rocD Location: 192764-192881 bp Feature: domain Description: rocD Location: 192 764-192 881 bp Feature: gene Location: 474886-475425 bp Feature: domain Description: HTH_23 Location: 474949-475075 bp Feature: domain Description: HTH_2 3 Location: 474949-475075 bp Feature: domain Description: HTH_33 Location: 475177-475351 bp Feature: domain Description: HTH_33 Location: 475177-475351 bp Feature: gene Location: 475646-476107 bp Feature: gene Location: 476173-477444 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 476389-477046 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 476389-477046 bp Feature: domain Description: GIIM Note: maturase Location: 477124-477346 bp Feature: domain Description: GIIM Note: maturase Location: 47712 4-477346 bp Feature: gene Location: 477816-477965 bp Feature: gene Location: 478133-478627 bp Feature: domain Description: Acetyltransf_3 Location: 478148-478550 bp Feature: domain Description: Acetyltransf_3 Location: 478148-478550 bp Feature: gene Location: 10182512-10184017 bp Feature: domain Description: HTH_LacI Location: 10182995-10183124 bp Feature: domain Description: HTH_LacI Location: 10182 995-1018312 4 bp Feature: domain Description: PBP1_uncharacterized_sugar_binding Location: 10183160-10183973 bp Feature: domain Description: PBP1_uncharacterized_sugar_binding Location: 10183160-10183973 bp Feature: gene Location: 10184053-10184817 bp Feature: domain Description: LmbE Location: 10184071-10184755 bp Feature: domain Description: LmbE Location: 10184071-10184755 bp Feature: gene Location: 10186081-10187907 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10186342-10187143 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10186342 -10187143 bp Feature: domain Description: Intron_maturas2 Location: 10187260-10187476 bp Feature: domain Description: Intron_maturas2 Location: 101872 60-10187476 bp Feature: domain Description: HNHc Note: nucleases Location: 10187671-10187833 bp Feature: domain Description: HNHc Note: nucleases Location: 10187671-10187833 bp Feature: gene Location: 10188405-10188929 bp Feature: domain Description: Transposase_20 Location: 10188513-10188768 bp Feature: domain Description: Transposase_2 0 Location: 10188513-10188768 bp Feature: gene Location: 10189242-10190609 bp Feature: domain Description: SufI Location: 10189389-10190601 bp Feature: domain Description: SufI Location: 10189389-10190601 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT