myRT

myRT report for GCA_003645185.1_ASM364518v1

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Seq: QNEL01000243.1 (11511 bp)
Overview 1 RT 1: 8081-11402 bp Neighborhood of RT #1 [8081, 11431] PBP2_HisK TMAO_torS RVT_N RVT-GII GIIM Feature: gene Location: 8081-9049 bp Feature: domain Description: PBP2_HisK Location: 8198-8858 bp Feature: domain Description: PBP2_HisK Location: 81 98-8858 bp Feature: gene Location: 9095-9511 bp Feature: domain Description: TMAO_torS Location: 9098-9497 bp Feature: domain Description: TMAO_torS Location: 9098-9497 bp Feature: gene Location: 10106-11431 bp Feature: domain Description: RVT_N Location: 10172-10418 bp Feature: domain Description: RVT_N Location: 1 01 72-1 041 8 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10460-11120 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0460-1 1 1 20 bp Feature: domain Description: GIIM Note: maturase Location: 11192-11402 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 1 92-1 1 402 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PBP2_HisK (cd13704), TMAO_torS (TIGR02956), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: QNEL01000129.1 (17567 bp)
Overview 1 RT 1: 1-6884 bp Neighborhood of RT #1 [1, 6886] DUF11 vWFA DUF29 RVT-UNC sdhA_frdA_Gneg Feature: gene Location: 1-1110 bp Feature: domain Description: DUF11 Location: 4-193 bp Feature: domain Description: DUF11 Location: 4-193 bp Feature: domain Description: vWFA Location: 688-1099 bp Feature: domain Description: vWFA Location: 688-1099 bp Feature: gene Location: 1790-2935 bp Feature: domain Description: DUF29 Location: 2612-2855 bp Feature: domain Description: DUF2 9 Location: 2 612 -2 855 bp Feature: gene Location: 3040-4197 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 3055-3223 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 3055-32 2 3 bp Feature: gene Location: 4371-4706 bp Feature: gene Location: 5195-6886 bp Feature: domain Description: sdhA_frdA_Gneg Location: 5210-6884 bp Feature: domain Description: sdhA_frdA_Gneg Location: 52 10-6884 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF11 (pfam01345), vWFA (cl00057), DUF29 (pfam01724), RVT-UG10/RVT-CRISPR/RVT-UG12(RVT-UNC), sdhA_frdA_Gneg

Seq: QNEL01000342.1 (8670 bp)
Overview 1 RT 1: 210-3615 bp Neighborhood of RT #1 [210, 3731] RVT-UG4 COG3950 COG3950 TIGR02646 Feature: gene Location: 210-1718 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 684-1119 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 684-1119 bp Feature: gene Location: 1882-3138 bp Feature: domain Description: COG3950 Location: 1885-2086 bp Feature: domain Description: COG3 950 Location: 1885-2086 bp Feature: domain Description: COG3950 Location: 2551-2941 bp Feature: domain Description: COG3 950 Location: 2551-2941 bp Feature: gene Location: 3135-3731 bp Feature: domain Description: TIGR02646 Location: 3234-3615 bp Feature: domain Description: TIGR02646 Location: 3 23 4-3 615 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4, COG3950 (Predicted ATP-binding protein involved in virulence ), TIGR02646 (TIGR02646 family protein)

Seq: QNEL01000004.1 (42596 bp)
Overview 1 RT 1: 32401-42528 bp Neighborhood of RT #1 [32401, 42593] PKD PKD PKD PKD PKD Peptidases_S8_Subtilisin_like choice_anch_D PKD PKD PKD PKD PKD PKD PKD PKD PKD PKD RVT_N RVT-GII YkfC HNH Feature: gene Location: 32401-36060 bp Feature: domain Description: PKD Location: 32491-32707 bp Feature: domain Description: PKD Location: 324 91-32707 bp Feature: domain Description: PKD Location: 32791-32953 bp Feature: domain Description: PKD Location: 32791-32953 bp Feature: domain Description: PKD Location: 33007-33301 bp Feature: domain Description: PKD Location: 33007-33301 bp Feature: domain Description: PKD Location: 33355-33571 bp Feature: domain Description: PKD Location: 33355-33571 bp Feature: domain Description: PKD Location: 33709-33877 bp Feature: domain Description: PKD Location: 33709-33877 bp Feature: domain Description: Peptidases_S8_Subtilisin_like Location: 34447-35278 bp Feature: domain Description: Peptidases_S8_Subtilisin_like Location: 34 4 4 7-35278 bp Feature: domain Description: choice_anch_D Location: 35284-35590 bp Feature: domain Description: choice_anch_D Location: 35284 -35590 bp Feature: gene Location: 36250-40746 bp Feature: domain Description: PKD Location: 36322-36532 bp Feature: domain Description: PKD Location: 36322-36532 bp Feature: domain Description: PKD Location: 36589-36817 bp Feature: domain Description: PKD Location: 36589-36817 bp Feature: domain Description: PKD Location: 36856-37078 bp Feature: domain Description: PKD Location: 36856-37078 bp Feature: domain Description: PKD Location: 37099-37327 bp Feature: domain Description: PKD Location: 37099-37327 bp Feature: domain Description: PKD Location: 37363-37594 bp Feature: domain Description: PKD Location: 37363-37594 bp Feature: domain Description: PKD Location: 37627-37846 bp Feature: domain Description: PKD Location: 37627-3784 6 bp Feature: domain Description: PKD Location: 37957-38125 bp Feature: domain Description: PKD Location: 37957-38125 bp Feature: domain Description: PKD Location: 38248-38440 bp Feature: domain Description: PKD Location: 3824 8-384 4 0 bp Feature: domain Description: PKD Location: 38848-39064 bp Feature: domain Description: PKD Location: 3884 8-39064 bp Feature: domain Description: PKD Location: 39919-40156 bp Feature: domain Description: PKD Location: 39919-4 0156 bp Feature: gene Location: 40902-42593 bp Feature: domain Description: RVT_N Location: 40920-41166 bp Feature: domain Description: RVT_N Location: 4 0920-4 1166 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41208-41868 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 1208-4 1868 bp Feature: domain Description: YkfC Location: 42021-42285 bp Feature: domain Description: YkfC Location: 4 2021-4 2285 bp Feature: domain Description: HNH Note: nucleases Location: 42396-42528 bp Feature: domain Description: HNH Note: nucleases Location: 4 2396-4 2528 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PKD (smart00089), Peptidases_S8_Subtilisin_like (cd07473), choice_anch_D (NF012200), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844)

Seq: QNEL01000107.1 (19148 bp)
Overview 1 RT 1: 600-3753 bp Neighborhood of RT #1 [600, 3767] RVT_N RVT-GII GIIM HNH rmlA Feature: gene Location: 600-2336 bp Feature: domain Description: RVT_N Location: 663-909 bp Feature: domain Description: RVT_N Location: 663-909 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 951-1611 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 95 1-1611 bp Feature: domain Description: GIIM Note: maturase Location: 1683-1917 bp Feature: domain Description: GIIM Note: maturase Location: 1683-1917 bp Feature: domain Description: HNH Note: nucleases Location: 2139-2274 bp Feature: domain Description: HNH Note: nucleases Location: 2139-2274 bp Feature: gene Location: 2564-2731 bp Feature: gene Location: 2787-3767 bp Feature: domain Description: rmlA Location: 2901-3753 bp Feature: domain Description: rmlA Location: 2901-375 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), rmlA (TIGR01207)

Seq: QNEL01000178.1 (13746 bp)
Overview 1 RT 1: 8456-11000 bp Neighborhood of RT #1 [8456, 11000] RVT-UG4 Feature: gene Location: 8456-8638 bp Feature: gene Location: 8739-8912 bp Feature: gene Location: 9012-10532 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 9486-9921 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 9486 -9921 bp Feature: gene Location: 10563-10724 bp Feature: gene Location: 10803-11000 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4

Seq: QNEL01000247.1 (11343 bp)
Overview 1 RT 1: 1793-8948 bp Neighborhood of RT #1 [1793, 9283] SseC FlgO RVT_N RVT-GII YkfC HNHc CHAT AAA_16 Feature: gene Location: 1793-3037 bp Feature: domain Description: SseC Location: 2678-2879 bp Feature: domain Description: SseC Location: 267 8-287 9 bp Feature: gene Location: 3423-3980 bp Feature: domain Description: FlgO Location: 3528-3945 bp Feature: domain Description: FlgO Location: 3528-3945 bp Feature: gene Location: 4116-5849 bp Feature: domain Description: RVT_N Location: 4176-4422 bp Feature: domain Description: RVT_N Location: 417 6-4422 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4464-5124 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4464-5124 bp Feature: domain Description: YkfC Location: 5277-5547 bp Feature: domain Description: YkfC Location: 527 7 -5547 bp Feature: domain Description: HNHc Note: nucleases Location: 5634-5784 bp Feature: domain Description: HNHc Note: nucleases Location: 5634-57 84 bp Feature: gene Location: 6440-7195 bp Feature: gene Location: 7397-9283 bp Feature: domain Description: CHAT Location: 7502-8417 bp Feature: domain Description: CHAT Location: 7 502-8417 bp Feature: domain Description: AAA_16 Location: 8585-8948 bp Feature: domain Description: AAA_16 Location: 8585-8948 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SseC (pfam04888), FlgO (pfam17680), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507), CHAT (pfam12770), AAA_16 (pfam13191)

Seq: QNEL01000509.1 (5321 bp)
Overview 1 RT 1: 1015-5247 bp Neighborhood of RT #1 [1015, 5318] Sulfotransfer_2 PRK12462 RVT_N RVT-GII GIIM HNH gabD Feature: gene Location: 1015-1365 bp Feature: domain Description: Sulfotransfer_2 Location: 1021-1279 bp Feature: domain Description: Sulfotransfer_2 Location: 1021-1279 bp Feature: gene Location: 1533-2627 bp Feature: domain Description: PRK12462 Location: 1539-2619 bp Feature: domain Description: PRK12462 Location: 1539-2619 bp Feature: gene Location: 2854-4551 bp Feature: domain Description: RVT_N Location: 2932-3172 bp Feature: domain Description: RVT_N Location: 2932-3172 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3220-3892 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3220-38 92 bp Feature: domain Description: GIIM Note: maturase Location: 3964-4195 bp Feature: domain Description: GIIM Note: maturase Location: 3964-4195 bp Feature: domain Description: HNH Note: nucleases Location: 4390-4522 bp Feature: domain Description: HNH Note: nucleases Location: 4390-4522 bp Feature: gene Location: 5103-5318 bp Feature: domain Description: gabD Location: 5106-5247 bp Feature: domain Description: gabD Location: 5106-5247 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Sulfotransfer_2 (pfam03567), PRK12462 (phosphoserine aminotransferase; Provisional), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), gabD (PRK11241)

Seq: QNEL01000167.1 (14648 bp)
Overview 1 RT 1: 6121-12497 bp Neighborhood of RT #1 [6121, 12511] GIIM RVT_N RVT-GII FhaB AAA-ATPase_like PDDEXK_9 Feature: gene Location: 6121-6252 bp Feature: gene Location: 6887-7312 bp Feature: domain Description: GIIM Note: maturase Location: 6890-7115 bp Feature: domain Description: GIIM Note: maturase Location: 689 0-7115 bp Feature: gene Location: 7413-8423 bp Feature: domain Description: RVT_N Location: 7491-7734 bp Feature: domain Description: RVT_N Location: 749 1-7734 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7779-8409 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7779 -8409 bp Feature: gene Location: 9014-10633 bp Feature: domain Description: FhaB Location: 9071-10397 bp Feature: domain Description: FhaB Location: 9 071-1039 7 bp Feature: gene Location: 10877-12511 bp Feature: domain Description: AAA-ATPase_like Location: 10886-11723 bp Feature: domain Description: AAA-ATPase_like Location: 10886-11723 bp Feature: domain Description: PDDEXK_9 Location: 12185-12497 bp Feature: domain Description: PDDEXK_9 Location: 12185-1249 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GIIM (pfam08388), RVT_N (pfam13655), RVT-GII, FhaB (COG3210), AAA-ATPase_like (pfam09820), PDDEXK_9 (pfam08011)