myRT

myRT report for GCA_003645315.1_ASM364531v1

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Seq: QNET01000687.1 (4527 bp)
Overview 1 RT 1: 1046-4377 bp Neighborhood of RT #1 [1046, 4397] STKc_PknB_like InsQ RVT-GII GIIM McrA Feature: gene Location: 1046-2323 bp Feature: domain Description: STKc_PknB_like Location: 1520-2306 bp Feature: domain Description: STKc_PknB_like Location: 1 520-2306 bp Feature: gene Location: 2399-3007 bp Feature: domain Description: InsQ Location: 2426-2867 bp Feature: domain Description: InsQ Location: 2426-2867 bp Feature: gene Location: 3432-4397 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3450-3681 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3450-3681 bp Feature: domain Description: GIIM Note: maturase Location: 3756-3987 bp Feature: domain Description: GIIM Note: maturase Location: 3756-3987 bp Feature: domain Description: McrA Location: 4056-4377 bp Feature: domain Description: McrA Location: 4056-4377 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT STKc_PknB_like (cd14014), InsQ (COG0675), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: QNET01000618.1 (5161 bp)
Overview 1 RT 1: 1736-4986 bp Neighborhood of RT #1 [1736, 4991] RVT-GII GIIM HNHc RVT_N Feature: gene Location: 1736-2608 bp Feature: gene Location: 2697-3158 bp Feature: gene Location: 3252-4727 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3342-4002 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3342 -4002 bp Feature: domain Description: GIIM Note: maturase Location: 4074-4308 bp Feature: domain Description: GIIM Note: maturase Location: 4074-4308 bp Feature: domain Description: HNHc Note: nucleases Location: 4503-4662 bp Feature: domain Description: HNHc Note: nucleases Location: 4503-4662 bp Feature: gene Location: 4818-4991 bp Feature: domain Description: RVT_N Location: 4884-4986 bp Feature: domain Description: RVT_N Location: 4884-4986 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNHc (smart00507), RVT_N (pfam13655)

Seq: QNET01000030.1 (24047 bp)
Overview 1 RT 1: 9744-15887 bp Neighborhood of RT #1 [9744, 15973] gabD RVT_N RVT-GII GIIM HNH PRK12462 Sulfotransfer_2 Feature: gene Location: 9744-9929 bp Feature: gene Location: 10371-11885 bp Feature: domain Description: gabD Location: 10374-11814 bp Feature: domain Description: gabD Location: 103 74-11814 bp Feature: gene Location: 12437-14134 bp Feature: domain Description: RVT_N Location: 12515-12755 bp Feature: domain Description: RVT_N Location: 12515-12755 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12803-13475 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12803 -13 475 bp Feature: domain Description: GIIM Note: maturase Location: 13547-13778 bp Feature: domain Description: GIIM Note: maturase Location: 13 547-13 778 bp Feature: domain Description: HNH Note: nucleases Location: 13973-14105 bp Feature: domain Description: HNH Note: nucleases Location: 13 973 -14105 bp Feature: gene Location: 14361-15455 bp Feature: domain Description: PRK12462 Location: 14367-15447 bp Feature: domain Description: PRK12462 Location: 143 67-15447 bp Feature: gene Location: 15623-15973 bp Feature: domain Description: Sulfotransfer_2 Location: 15629-15887 bp Feature: domain Description: Sulfotransfer_2 Location: 15629-15887 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT gabD (PRK11241), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), PRK12462 (phosphoserine aminotransferase; Provisional), Sulfotransfer_2 (pfam03567)

Seq: QNET01000315.1 (8737 bp)
Overview 1 RT 1: 2002-5913 bp Neighborhood of RT #1 [2002, 5913] RVT_N RVT-GII GIIM McrA SEL1 SEL1 KOG1550 SEL1 SEL1 SEL1 SEL1 Feature: gene Location: 2002-2283 bp Feature: gene Location: 2374-2784 bp Feature: domain Description: RVT_N Location: 2398-2566 bp Feature: domain Description: RVT_N Location: 2398-2566 bp Feature: gene Location: 2810-3994 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2816-3272 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2816-3272 bp Feature: domain Description: GIIM Note: maturase Location: 3344-3578 bp Feature: domain Description: GIIM Note: maturase Location: 334 4 -3578 bp Feature: domain Description: McrA Location: 3617-3962 bp Feature: domain Description: McrA Location: 3617-3962 bp Feature: gene Location: 4270-5595 bp Feature: domain Description: SEL1 Location: 4675-4789 bp Feature: domain Description: SEL1 Location: 4 675-4 789 bp Feature: domain Description: SEL1 Location: 4795-4882 bp Feature: domain Description: SEL1 Location: 4 795-4 882 bp Feature: domain Description: KOG1550 Location: 4942-5059 bp Feature: domain Description: KOG1550 Location: 4 94 2-5059 bp Feature: domain Description: SEL1 Location: 5089-5188 bp Feature: domain Description: SEL1 Location: 5089-5188 bp Feature: domain Description: SEL1 Location: 5200-5287 bp Feature: domain Description: SEL1 Location: 5200-5287 bp Feature: domain Description: SEL1 Location: 5323-5407 bp Feature: domain Description: SEL1 Location: 5323-54 07 bp Feature: domain Description: SEL1 Location: 5428-5521 bp Feature: domain Description: SEL1 Location: 54 28-5521 bp Feature: gene Location: 5785-5913 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), SEL1 (smart00671), KOG1550 (KOG1550, Extracellular protein SEL-1 and related proteins )

Seq: QNET01001015.1 (2585 bp)
Overview 1 RT 1: 210-2473 bp Neighborhood of RT #1 [210, 2583] RVT-UG4 AAA_23 Feature: gene Location: 210-1718 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 684-1119 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 684-1119 bp Feature: gene Location: 1882-2583 bp Feature: domain Description: AAA_23 Location: 1897-2473 bp Feature: domain Description: AAA_23 Location: 1897-2473 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4, AAA_23 (pfam13476)

Seq: QNET01000201.1 (11486 bp)
Overview 1 RT 1: 8056-11377 bp Neighborhood of RT #1 [8056, 11406] PBP2_HisK TMAO_torS RVT_N RVT-GII GIIM Feature: gene Location: 8056-9024 bp Feature: domain Description: PBP2_HisK Location: 8173-8833 bp Feature: domain Description: PBP2_HisK Location: 8173-8833 bp Feature: gene Location: 9070-9486 bp Feature: domain Description: TMAO_torS Location: 9073-9472 bp Feature: domain Description: TMAO_torS Location: 9073-9472 bp Feature: gene Location: 10081-11406 bp Feature: domain Description: RVT_N Location: 10147-10393 bp Feature: domain Description: RVT_N Location: 10147-10393 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10435-11095 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10435-11095 bp Feature: domain Description: GIIM Note: maturase Location: 11167-11377 bp Feature: domain Description: GIIM Note: maturase Location: 1116 7-11377 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PBP2_HisK (cd13704), TMAO_torS (TIGR02956), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: QNET01000384.1 (7488 bp)
Overview 1 RT 1: 2093-7487 bp Neighborhood of RT #1 [2093, 7486] AAA-ATPase_like PDDEXK_9 FhaB RVT_N RVT-GII GIIM Feature: gene Location: 2093-3727 bp Feature: domain Description: AAA-ATPase_like Location: 2102-2939 bp Feature: domain Description: AAA-ATPase_like Location: 2102-2939 bp Feature: domain Description: PDDEXK_9 Location: 3401-3713 bp Feature: domain Description: PDDEXK_9 Location: 3401-37 13 bp Feature: gene Location: 3971-5590 bp Feature: domain Description: FhaB Location: 4028-5354 bp Feature: domain Description: FhaB Location: 4028-5354 bp Feature: gene Location: 6181-7191 bp Feature: domain Description: RVT_N Location: 6259-6502 bp Feature: domain Description: RVT_N Location: 6259-6502 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6547-7177 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6547 -7 17 7 bp Feature: gene Location: 7292-7486 bp Feature: domain Description: GIIM Note: maturase Location: 7295-7487 bp Feature: domain Description: GIIM Note: maturase Location: 7 295-7 487 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA-ATPase_like (pfam09820), PDDEXK_9 (pfam08011), FhaB (COG3210), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: QNET01000207.1 (11343 bp)
Overview 1 RT 1: 1793-8948 bp Neighborhood of RT #1 [1793, 9283] SseC FlgO RVT_N RVT-GII YkfC HNHc CHAT AAA_16 Feature: gene Location: 1793-3037 bp Feature: domain Description: SseC Location: 2678-2879 bp Feature: domain Description: SseC Location: 2678 -28 79 bp Feature: gene Location: 3423-3980 bp Feature: domain Description: FlgO Location: 3528-3945 bp Feature: domain Description: FlgO Location: 3528 -3945 bp Feature: gene Location: 4116-5849 bp Feature: domain Description: RVT_N Location: 4176-4422 bp Feature: domain Description: RVT_N Location: 4176-4422 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4464-5124 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4464-5124 bp Feature: domain Description: YkfC Location: 5277-5547 bp Feature: domain Description: YkfC Location: 5277-5547 bp Feature: domain Description: HNHc Note: nucleases Location: 5634-5784 bp Feature: domain Description: HNHc Note: nucleases Location: 5634-578 4 bp Feature: gene Location: 6440-7195 bp Feature: gene Location: 7397-9283 bp Feature: domain Description: CHAT Location: 7502-8417 bp Feature: domain Description: CHAT Location: 7502-8 417 bp Feature: domain Description: AAA_16 Location: 8585-8948 bp Feature: domain Description: AAA_16 Location: 8 58 5-8 948 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SseC (pfam04888), FlgO (pfam17680), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNHc (smart00507), CHAT (pfam12770), AAA_16 (pfam13191)

Seq: QNET01000090.1 (16679 bp)
Overview 1 RT 1: 145-9897 bp Neighborhood of RT #1 [145, 10367] RVT_N RVT-GII YkfC HNH PKD PKD PKD PKD PKD PKD PKD PKD PKD PKD PKD PKD PKD PKD PKD Peptidases_S8_Subtilisin_like choice_anch_D Feature: gene Location: 145-1866 bp Feature: domain Description: RVT_N Location: 193-439 bp Feature: domain Description: RVT_N Location: 19 3-439 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 481-1141 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 481-1141 bp Feature: domain Description: YkfC Location: 1294-1558 bp Feature: domain Description: YkfC Location: 129 4-1558 bp Feature: domain Description: HNH Note: nucleases Location: 1669-1801 bp Feature: domain Description: HNH Note: nucleases Location: 1669 -1801 bp Feature: gene Location: 2022-6518 bp Feature: domain Description: PKD Location: 2094-2304 bp Feature: domain Description: PKD Location: 209 4-2304 bp Feature: domain Description: PKD Location: 2361-2589 bp Feature: domain Description: PKD Location: 2361-2589 bp Feature: domain Description: PKD Location: 2628-2850 bp Feature: domain Description: PKD Location: 2628-2850 bp Feature: domain Description: PKD Location: 2871-3099 bp Feature: domain Description: PKD Location: 2871-309 9 bp Feature: domain Description: PKD Location: 3135-3366 bp Feature: domain Description: PKD Location: 3135-3366 bp Feature: domain Description: PKD Location: 3399-3618 bp Feature: domain Description: PKD Location: 339 9 -3618 bp Feature: domain Description: PKD Location: 3729-3897 bp Feature: domain Description: PKD Location: 3729 -389 7 bp Feature: domain Description: PKD Location: 4020-4212 bp Feature: domain Description: PKD Location: 4020-4212 bp Feature: domain Description: PKD Location: 4620-4836 bp Feature: domain Description: PKD Location: 4620-4836 bp Feature: domain Description: PKD Location: 5691-5928 bp Feature: domain Description: PKD Location: 569 1-59 28 bp Feature: gene Location: 6708-10367 bp Feature: domain Description: PKD Location: 6798-7014 bp Feature: domain Description: PKD Location: 679 8-7014 bp Feature: domain Description: PKD Location: 7098-7260 bp Feature: domain Description: PKD Location: 709 8-7260 bp Feature: domain Description: PKD Location: 7314-7608 bp Feature: domain Description: PKD Location: 7314-7608 bp Feature: domain Description: PKD Location: 7662-7878 bp Feature: domain Description: PKD Location: 7662-7878 bp Feature: domain Description: PKD Location: 8016-8184 bp Feature: domain Description: PKD Location: 8016-8184 bp Feature: domain Description: Peptidases_S8_Subtilisin_like Location: 8754-9585 bp Feature: domain Description: Peptidases_S8_Subtilisin_like Location: 8754-9 585 bp Feature: domain Description: choice_anch_D Location: 9591-9897 bp Feature: domain Description: choice_anch_D Location: 9 59 1-9 89 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), PKD (smart00089), Peptidases_S8_Subtilisin_like (cd07473), choice_anch_D (NF012200)

Seq: QNET01000615.1 (5187 bp)
Overview 1 RT 1: 2-5187 bp Neighborhood of RT #1 [2, 5186] DUF29 RVT-UNC sdhA_frdA_Gneg Feature: gene Location: 2-253 bp Feature: gene Location: 933-2078 bp Feature: domain Description: DUF29 Location: 1755-1998 bp Feature: domain Description: DUF29 Location: 1755-1998 bp Feature: gene Location: 2183-3340 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2198-2366 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 2198-2366 bp Feature: gene Location: 3415-3750 bp Feature: gene Location: 4239-5186 bp Feature: domain Description: sdhA_frdA_Gneg Location: 4254-5187 bp Feature: domain Description: sdhA_frdA_Gneg Location: 4254-5187 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF29 (pfam01724), RVT-UG10/RVT-CRISPR/RVT-UG12(RVT-UNC), sdhA_frdA_Gneg

Seq: QNET01000378.1 (7584 bp)
Overview 1 RT 1: 1389-7433 bp Neighborhood of RT #1 [1389, 7433] vWFA FixG_C RocR RVT_N RVT-GII GIIM HNH Feature: gene Location: 1389-4223 bp Feature: domain Description: vWFA Location: 2223-2442 bp Feature: domain Description: vWFA Location: 2223-2442 bp Feature: domain Description: FixG_C Location: 3675-3879 bp Feature: domain Description: FixG_C Location: 3675-3879 bp Feature: gene Location: 4399-4791 bp Feature: domain Description: RocR Location: 4405-4777 bp Feature: domain Description: RocR Location: 4405-4777 bp Feature: gene Location: 5249-6985 bp Feature: domain Description: RVT_N Location: 5312-5558 bp Feature: domain Description: RVT_N Location: 5312-5558 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5600-6260 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5600-6260 bp Feature: domain Description: GIIM Note: maturase Location: 6332-6566 bp Feature: domain Description: GIIM Note: maturase Location: 6332-6566 bp Feature: domain Description: HNH Note: nucleases Location: 6788-6923 bp Feature: domain Description: HNH Note: nucleases Location: 6788-6923 bp Feature: gene Location: 7275-7433 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT vWFA (cl00057), FixG_C (pfam11614), RocR (COG3829), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844)

Seq: QNET01000255.1 (10059 bp)
Overview 1 RT 1: 4769-7313 bp Neighborhood of RT #1 [4769, 7313] RVT-UG4 Feature: gene Location: 4769-4951 bp Feature: gene Location: 5052-5225 bp Feature: gene Location: 5325-6845 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 5799-6234 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 5799-6234 bp Feature: gene Location: 6876-7037 bp Feature: gene Location: 7116-7313 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4

Seq: QNET01000356.1 (7928 bp)
Overview 1 RT 1: 1-2163 bp Neighborhood of RT #1 [1, 2163] RVT_N RVT-GII Feature: gene Location: 1-924 bp Feature: domain Description: RVT_N Location: 61-307 bp Feature: domain Description: RVT_N Location: 61-307 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 349-922 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 349-922 bp Feature: gene Location: 1155-1373 bp Feature: gene Location: 2032-2163 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII