myRT

myRT report for GCA_003647245.1_ASM364724v1

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Seq: QMMM01000176.1 (6937 bp)
Overview 1 RT 1: 134-3440 bp Neighborhood of RT #1 [134, 3448] group_II_RT_mat RVT-GII RVT-UNC GIIM MurNAc-LAA NhaP Feature: gene Location: 134-325 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 239-320 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 239-320 bp Feature: gene Location: 479-856 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 485-851 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 485-851 bp Feature: gene Location: 902-1252 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 935-1037 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 935-1 037 bp Feature: domain Description: GIIM Note: maturase Location: 1124-1235 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 24-1 235 bp Feature: gene Location: 1338-2030 bp Feature: domain Description: MurNAc-LAA Location: 1374-1740 bp Feature: domain Description: MurNAc-LAA Location: 1 374-1 740 bp Feature: gene Location: 2246-3448 bp Feature: domain Description: NhaP Location: 2270-3440 bp Feature: domain Description: NhaP Location: 2270-3440 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), RVT-GII, RVT-UG4/RVT-GII/RVT-CRISPR(RVT-UNC), GIIM (pfam08388), MurNAc-LAA (cl02713), NhaP (COG0025)

Seq: QMMM01000412.1 (3796 bp)
Overview 1 RT 1: 229-3793 bp Neighborhood of RT #1 [229, 3795] RVT-GII HicB Laminin_G_3 Feature: gene Location: 229-834 bp Feature: gene Location: 979-2016 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 988-1636 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 988-1636 bp Feature: gene Location: 2561-2785 bp Feature: domain Description: HicB Location: 2564-2744 bp Feature: domain Description: HicB Location: 2 564-2 744 bp Feature: gene Location: 2923-3795 bp Feature: domain Description: Laminin_G_3 Location: 3388-3793 bp Feature: domain Description: Laminin_G_3 Location: 3388-3793 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HicB (pfam05534), Laminin_G_3 (pfam13385)

Seq: QMMM01000392.1 (3994 bp)
Overview 1 RT 1: 22-3234 bp Neighborhood of RT #1 [22, 3269] Cmr6_III-B RVT-CRISPR Cas1_I-II-III Cas2_I_II_III Feature: gene Location: 22-918 bp Feature: domain Description: Cmr6_III-B Location: 253-910 bp Feature: domain Description: Cmr6_III-B Location: 253 -910 bp Feature: gene Location: 1011-1970 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1236-1833 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 123 6-183 3 bp Feature: gene Location: 1989-2990 bp Feature: domain Description: Cas1_I-II-III Location: 1998-2952 bp Feature: domain Description: Cas1_I-II-III Location: 1998-2952 bp Feature: gene Location: 2994-3269 bp Feature: domain Description: Cas2_I_II_III Location: 3003-3234 bp Feature: domain Description: Cas2_I_II_III Location: 3 003 -3 23 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cmr6_III-B (cd09661), RVT-CRISPR, Cas1_I-II-III (cl00656), Cas2_I_II_III (cl11442)

Seq: QMMM01000462.1 (3394 bp)
Overview 1 RT 1: 1-3391 bp Neighborhood of RT #1 [1, 3391] CHU_C RVT-GII GIIM Feature: gene Location: 1-513 bp Feature: domain Description: CHU_C Location: 187-394 bp Feature: domain Description: CHU_C Location: 187-394 bp Feature: gene Location: 640-1017 bp Feature: gene Location: 1171-2430 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1384-2053 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1384 -2053 bp Feature: domain Description: GIIM Note: maturase Location: 2173-2347 bp Feature: domain Description: GIIM Note: maturase Location: 2173-234 7 bp Feature: gene Location: 3221-3391 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CHU_C (pfam13585), RVT-GII, GIIM (pfam08388)