myRT

myRT report for GCA_003647325.1_ASM364732v1

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Seq: QMMQ01000497.1 (3205 bp)
Overview 1 RT 1: 3-2561 bp Neighborhood of RT #1 [3, 2635] RVT-UG13 Zn_Tnp_IS91 Y2_Tnp Phage_int_SAM_4 INT_IntI_C Feature: gene Location: 3-359 bp Feature: RT Description: RVT-UG13 Note: UG13 RT Location: 15-108 bp Feature: RT Description: RVT-UG1 3 Note: UG1 3 RT Location: 1 5-1 08 bp Feature: gene Location: 673-1764 bp Feature: domain Description: Zn_Tnp_IS91 Location: 691-964 bp Feature: domain Description: Zn_Tnp_IS91 Location: 691 -964 bp Feature: domain Description: Y2_Tnp Location: 1093-1579 bp Feature: domain Description: Y2_Tnp Location: 1 093-1 579 bp Feature: gene Location: 1751-2635 bp Feature: domain Description: Phage_int_SAM_4 Location: 1772-2012 bp Feature: domain Description: Phage_int_SAM_4 Location: 1 772-201 2 bp Feature: domain Description: INT_IntI_C Location: 2048-2561 bp Feature: domain Description: INT_IntI_C Location: 2048-2561 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG13, Zn_Tnp_IS91 (pfam14319), Y2_Tnp (pfam04986), Phage_int_SAM_4 (pfam13495), INT_IntI_C (cd01193)

Seq: QMMQ01000613.1 (2807 bp)
Overview 1 RT 1: 448-2794 bp Neighborhood of RT #1 [448, 2805] HTH_21 RVT-GII GIIM PHA02517 Feature: gene Location: 448-837 bp Feature: domain Description: HTH_21 Location: 556-718 bp Feature: domain Description: HTH_2 1 Location: 556-718 bp Feature: gene Location: 956-1348 bp Feature: gene Location: 1330-2568 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1534-2191 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1534-2 191 bp Feature: domain Description: GIIM Note: maturase Location: 2269-2497 bp Feature: domain Description: GIIM Note: maturase Location: 2 2 69-2 497 bp Feature: gene Location: 2632-2805 bp Feature: domain Description: PHA02517 Location: 2659-2794 bp Feature: domain Description: PHA02 517 Location: 2 659-2 794 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_21 (pfam13276), RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed)