myRT

myRT report for GCA_003647525.1_ASM364752v1

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Seq: QMMZ01000117.1 (6565 bp)
Overview 1 RT 1: 4375-6565 bp Neighborhood of RT #1 [4375, 6565] CRISPR_Cas2 Cas2_I_II_III RVT-CRISPR Feature: gene Location: 4375-4731 bp Feature: domain Description: CRISPR_Cas2 Location: 4393-4588 bp Feature: domain Description: CRISPR_Cas2 Location: 4393-4588 bp Feature: gene Location: 4738-5022 bp Feature: domain Description: Cas2_I_II_III Location: 4759-4954 bp Feature: domain Description: Cas2_I_II_III Location: 4759-4954 bp Feature: gene Location: 5034-5888 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 5241-5838 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 5241 -5838 bp Feature: gene Location: 5977-6144 bp Feature: gene Location: 6260-6565 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CRISPR_Cas2 (pfam09827), Cas2_I_II_III (cl11442), RVT-CRISPR

Seq: QMMZ01000129.1 (6295 bp)
Overview 1 RT 1: 761-5304 bp Neighborhood of RT #1 [761, 5304] TPR TPR TPR_6 TPR MTAN RVT-Retrons Feature: gene Location: 761-2389 bp Feature: domain Description: TPR Location: 776-1004 bp Feature: domain Description: TPR Location: 776-1004 bp Feature: domain Description: TPR Location: 1046-1484 bp Feature: domain Description: TPR Location: 1046-1484 bp Feature: domain Description: TPR_6 Location: 1637-1724 bp Feature: domain Description: TPR_6 Location: 1637-172 4 bp Feature: domain Description: TPR Location: 2018-2324 bp Feature: domain Description: TPR Location: 2 018-2 32 4 bp Feature: gene Location: 2473-3261 bp Feature: domain Description: MTAN Location: 2548-3193 bp Feature: domain Description: MTAN Location: 2 548-3193 bp Feature: gene Location: 3265-4485 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3661-4216 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3661-42 16 bp Feature: gene Location: 4619-5008 bp Feature: gene Location: 5083-5304 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TPR (smart00028), TPR_6 (pfam13174), MTAN (cd09008), RVT-Retrons

Seq: QMMZ01000032.1 (10213 bp)
Overview 1 RT 1: 3-2866 bp Neighborhood of RT #1 [3, 2934] RVT-CRISPR TPR Cas2_I_II_III Csx1_III-U Feature: gene Location: 3-1265 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 207-810 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 207-810 bp Feature: domain Description: TPR Location: 891-1191 bp Feature: domain Description: TPR Location: 891-1191 bp Feature: gene Location: 1262-1549 bp Feature: domain Description: Cas2_I_II_III Location: 1283-1511 bp Feature: domain Description: Cas2_I_II_III Location: 1283 -1511 bp Feature: gene Location: 1696-2934 bp Feature: domain Description: Csx1_III-U Location: 1768-2866 bp Feature: domain Description: Csx1_III-U Location: 1768-2866 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, TPR (smart00028), Cas2_I_II_III (cl11442), Csx1_III-U (cl21570)

Seq: QMMZ01000169.1 (5604 bp)
Overview 1 RT 1: 475-2838 bp Neighborhood of RT #1 [475, 3041] RVT-DGRs AbiEii Feature: gene Location: 475-627 bp Feature: gene Location: 742-894 bp Feature: gene Location: 1191-1958 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1263-1662 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1263-1662 bp Feature: gene Location: 2180-2317 bp Feature: gene Location: 2346-3041 bp Feature: domain Description: AbiEii Location: 2385-2838 bp Feature: domain Description: AbiEii Location: 2385-2838 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, AbiEii (pfam08843)