myRT

myRT report for GCA_003648455.1_ASM364845v1

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Seq: QMPG01000686.1 (2693 bp)
Overview 1 RT 1: 588-2637 bp Neighborhood of RT #1 [588, 2637] RVT-GII GIIM Feature: gene Location: 588-1952 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 924-1584 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 924-1 584 bp Feature: domain Description: GIIM Note: maturase Location: 1659-1872 bp Feature: domain Description: GIIM Note: maturase Location: 1 659-1 872 bp Feature: gene Location: 2434-2637 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: QMPG01000124.1 (8536 bp)
Overview 1 RT 1: 220-4027 bp Neighborhood of RT #1 [220, 4152] RVT-UG14 WG_beta_rep WG_beta_rep WG_beta_rep WG_beta_rep NT_KNTase_like Y_phosphatase3 Feature: gene Location: 220-1752 bp Feature: RT Description: RVT-UG14 Note: UG14 RT Location: 625-1096 bp Feature: RT Description: RVT-UG14 Note: UG14 RT Location: 62 5-1096 bp Feature: gene Location: 2027-2728 bp Feature: domain Description: WG_beta_rep Location: 2081-2156 bp Feature: domain Description: WG_beta_rep Location: 2 081-2 156 bp Feature: domain Description: WG_beta_rep Location: 2177-2270 bp Feature: domain Description: WG_beta_rep Location: 2 177-2 2 70 bp Feature: domain Description: WG_beta_rep Location: 2384-2471 bp Feature: domain Description: WG_beta_rep Location: 2 384-2 471 bp Feature: domain Description: WG_beta_rep Location: 2591-2672 bp Feature: domain Description: WG_beta_rep Location: 2 591-2 672 bp Feature: gene Location: 2725-4152 bp Feature: domain Description: NT_KNTase_like Location: 2740-2926 bp Feature: domain Description: NT_KNTase_like Location: 2 740-2 92 6 bp Feature: domain Description: Y_phosphatase3 Location: 3544-4027 bp Feature: domain Description: Y_phosphatase3 Location: 3544-402 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG14, WG_beta_rep (pfam14903), NT_KNTase_like (cd05403), Y_phosphatase3 (pfam13350)

Seq: QMPG01000391.1 (3892 bp)
Overview 1 RT 1: 2-3890 bp Neighborhood of RT #1 [2, 3890] group_II_RT_mat RVT-GII TlpA_like_family Laminin_G_3 Feature: gene Location: 2-409 bp Feature: gene Location: 414-647 bp Feature: gene Location: 895-1632 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 916-1081 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 916-1081 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1099-1363 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1099-13 63 bp Feature: gene Location: 1790-3307 bp Feature: domain Description: TlpA_like_family Location: 1916-2213 bp Feature: domain Description: TlpA_like_family Location: 1916-2213 bp Feature: domain Description: Laminin_G_3 Location: 2822-3233 bp Feature: domain Description: Laminin_G_3 Location: 2822-3 23 3 bp Feature: gene Location: 3648-3890 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), RVT-GII, TlpA_like_family (cd02966), Laminin_G_3 (pfam13385)

Seq: QMPG01000201.1 (6051 bp)
Overview 1 RT 1: 1-5133 bp Neighborhood of RT #1 [1, 5138] DUF4369 TryX_like_TryX_NRX Avd_like RVT-DGRs Fib_succ_major Feature: gene Location: 1-1227 bp Feature: domain Description: DUF4369 Location: 73-331 bp Feature: domain Description: DUF4 369 Location: 73-331 bp Feature: domain Description: TryX_like_TryX_NRX Location: 1042-1222 bp Feature: domain Description: TryX_like_TryX_NRX Location: 104 2-1222 bp Feature: gene Location: 1596-1823 bp Feature: domain Description: Avd_like Location: 1605-1797 bp Feature: domain Description: Avd_like Location: 1605-1797 bp Feature: gene Location: 1924-3141 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2122-2824 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2122-2824 bp Feature: gene Location: 3141-3647 bp Feature: gene Location: 3756-5138 bp Feature: domain Description: Fib_succ_major Location: 4593-5133 bp Feature: domain Description: Fib_succ_major Location: 4 593-5133 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4369 (pfam14289), TryX_like_TryX_NRX (cd03009), Avd_like (cd16376), RVT-DGRs, Fib_succ_major (TIGR02145)

Seq: QMPG01000448.1 (3579 bp)
Overview 1 RT 1: 36-3578 bp Neighborhood of RT #1 [36, 3578] YhcG YhcG_C RVT-GII GIIM Feature: gene Location: 36-1133 bp Feature: domain Description: YhcG Location: 381-519 bp Feature: domain Description: YhcG Location: 381-5 19 bp Feature: domain Description: YhcG_C Location: 621-1080 bp Feature: domain Description: YhcG_C Location: 621-1080 bp Feature: gene Location: 1222-2538 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1423-2038 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1423-2038 bp Feature: domain Description: GIIM Note: maturase Location: 2110-2320 bp Feature: domain Description: GIIM Note: maturase Location: 2110-2320 bp Feature: gene Location: 2601-2753 bp Feature: gene Location: 3348-3578 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YhcG (COG4804), YhcG_C, RVT-GII, GIIM (pfam08388)

Seq: QMPG01000719.1 (2604 bp)
Overview 1 RT 1: 127-1834 bp Neighborhood of RT #1 [127, 1848] group_II_RT_mat RVT-GII GIIM HNH Feature: gene Location: 127-1848 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 325-511 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 325-511 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 562-1162 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56 2-116 2 bp Feature: domain Description: GIIM Note: maturase Location: 1216-1447 bp Feature: domain Description: GIIM Note: maturase Location: 1216 -1447 bp Feature: domain Description: HNH Note: nucleases Location: 1702-1834 bp Feature: domain Description: HNH Note: nucleases Location: 1702-1834 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), RVT-GII, GIIM (pfam08388), HNH (pfam01844)