myRT

myRT report for GCA_003664795.1_ASM366479v1

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Seq: RCGN01000063.1 (41813 bp)
Overview 1 RT 1: 32202-35496 bp Neighborhood of RT #1 [32202, 35510] RVT-GII PRK10276 Feature: gene Location: 32202-32417 bp Feature: gene Location: 32684-32914 bp Feature: gene Location: 33148-34683 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33553-34291 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33553-34291 bp Feature: gene Location: 34734-34967 bp Feature: gene Location: 35085-35510 bp Feature: domain Description: PRK10276 Location: 35088-35496 bp Feature: domain Description: PRK1 0276 Location: 35088-35496 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)

Seq: RCGN01000020.1 (72518 bp)
Overview 1 RT 1: 583-7436 bp Neighborhood of RT #1 [583, 7453] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 583-1248 bp Feature: domain Description: INT_P4_C Location: 688-1246 bp Feature: domain Description: INT_P4_C Location: 688-12 46 bp Feature: gene Location: 1509-1949 bp Feature: domain Description: Integrase_1 Location: 1515-1731 bp Feature: domain Description: Integrase_1 Location: 1515-1731 bp Feature: gene Location: 2006-4084 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2414-2858 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2 414-2 858 bp Feature: gene Location: 4084-6693 bp Feature: domain Description: FimD Location: 4141-6682 bp Feature: domain Description: FimD Location: 4141-6682 bp Feature: gene Location: 6725-7453 bp Feature: domain Description: FimC Location: 6758-7436 bp Feature: domain Description: FimC Location: 6758-7436 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: RCGN01000085.1 (2199 bp)
Overview 1 RT 1: 2-2063 bp Neighborhood of RT #1 [2, 2197] RVT-UG19 RNase_HI_RT_Ty3 Integrase_H2C2 rve Feature: gene Location: 2-2197 bp Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 398-566 bp Feature: RT Description: RVT-UG19 Note: UG19 RT Location: 3 98-566 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 893-1232 bp Feature: domain Description: RNase_HI_RT_Ty3 Location: 893 -123 2 bp Feature: domain Description: Integrase_H2C2 Location: 1502-1670 bp Feature: domain Description: Integrase_H2C2 Location: 1502-1670 bp Feature: domain Description: rve Location: 1733-2063 bp Feature: domain Description: rve Location: 173 3 -2063 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG19, RNase_HI_RT_Ty3 (cd09274), Integrase_H2C2 (pfam17921), rve (pfam00665)