myRT

myRT report for GCA_003669085.1_ASM366908v1

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Seq: RAYA01003136.1 (323 bp)
Overview 1 RT 1: 67-322 bp Neighborhood of RT #1 [67, 321] RVT-GII Feature: gene Location: 67-321 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 262-322 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 262-322 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RAYA01000017.1 (60049 bp)
Overview 1 RT 1: 2606-15800 bp Neighborhood of RT #1 [2606, 15800] DUF3849 DUF3849 RVT-GII Intron_maturas2 LPD25 YtxK COG4646 HepA Feature: gene Location: 2606-3820 bp Feature: domain Description: DUF3849 Location: 2624-2987 bp Feature: domain Description: DUF3849 Location: 2 62 4-2 987 bp Feature: domain Description: DUF3849 Location: 3077-3446 bp Feature: domain Description: DUF3849 Location: 3077-3446 bp Feature: gene Location: 3909-4754 bp Feature: gene Location: 4787-6688 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5051-5891 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5051-5891 bp Feature: domain Description: Intron_maturas2 Location: 5972-6269 bp Feature: domain Description: Intron_maturas2 Location: 5972 -62 69 bp Feature: gene Location: 7280-15301 bp Feature: domain Description: LPD25 Location: 9443-9782 bp Feature: domain Description: LPD2 5 Location: 9443-9782 bp Feature: domain Description: YtxK Location: 11039-11783 bp Feature: domain Description: YtxK Location: 11039-11783 bp Feature: domain Description: COG4646 Location: 11912-14561 bp Feature: domain Description: COG4646 Location: 11912 -14561 bp Feature: domain Description: HepA Location: 15014-15194 bp Feature: domain Description: HepA Location: 15014-15194 bp Feature: gene Location: 15552-15800 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RAYA01000024.1 (56679 bp)
Overview 1 RT 1: 44285-48585 bp Neighborhood of RT #1 [44285, 48585] Avd_like RVT-DGRs Feature: gene Location: 44285-44443 bp Feature: gene Location: 44506-44910 bp Feature: domain Description: Avd_like Location: 44557-44893 bp Feature: domain Description: Avd_like Location: 44557-44893 bp Feature: gene Location: 45237-46340 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 45432-46038 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4543 2-4603 8 bp Feature: gene Location: 46325-48058 bp Feature: gene Location: 48100-48585 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RAYA01002892.1 (791 bp)
Overview 1 RT 1: 78-695 bp Neighborhood of RT #1 [78, 790] RVT-GII Feature: gene Location: 78-353 bp Feature: gene Location: 431-790 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 434-695 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 34 -695 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RAYA01000003.1 (87965 bp)
Overview 1 RT 1: 26978-31658 bp Neighborhood of RT #1 [26978, 32470] ChiA1_BD RVT-DGRs Avd_like BID_2 Feature: gene Location: 26978-27442 bp Feature: gene Location: 27439-28053 bp Feature: domain Description: ChiA1_BD Location: 27754-27880 bp Feature: domain Description: ChiA1_BD Location: 2775 4-27880 bp Feature: gene Location: 27983-29200 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 28262-28865 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 28262-28865 bp Feature: gene Location: 29621-30049 bp Feature: domain Description: Avd_like Location: 29696-29933 bp Feature: domain Description: Avd_like Location: 29696-29933 bp Feature: gene Location: 30104-32470 bp Feature: domain Description: BID_2 Location: 31526-31658 bp Feature: domain Description: BID_2 Location: 315 26-3165 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RAYA01001531.1 (824 bp)
Overview 1 RT 1: 1-634 bp Neighborhood of RT #1 [1, 726] RVT-GII GIIM Feature: gene Location: 1-726 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-319 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-319 bp Feature: domain Description: GIIM Note: maturase Location: 400-634 bp Feature: domain Description: GIIM Note: maturase Location: 400-6 34 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RAYA01001530.1 (505 bp)
Overview 1 RT 1: 8-500 bp Neighborhood of RT #1 [8, 502] RVT-GII Feature: gene Location: 8-502 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 197-500 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 197 -500 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RAYA01000324.1 (4203 bp)
Overview 1 RT 1: 905-4136 bp Neighborhood of RT #1 [905, 4201] RVT-GII TED Feature: gene Location: 905-1168 bp Feature: gene Location: 1432-1623 bp Feature: gene Location: 1889-3874 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2207-2912 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2207-2912 bp Feature: gene Location: 3953-4201 bp Feature: domain Description: TED Location: 4058-4136 bp Feature: domain Description: TED Location: 4058 -4136 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RAYA01000073.1 (27941 bp)
Overview 1 RT 1: 17860-22128 bp Neighborhood of RT #1 [17860, 22325] Maff2 RVT-GII HNHc PrgI Feature: gene Location: 17860-17991 bp Feature: domain Description: Maff2 Location: 17863-17989 bp Feature: domain Description: Maff2 Location: 17863-179 89 bp Feature: gene Location: 18257-18448 bp Feature: gene Location: 18747-20621 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19074-19812 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19 074-19 812 bp Feature: domain Description: HNHc Note: nucleases Location: 20352-20508 bp Feature: domain Description: HNHc Note: nucleases Location: 20352-20508 bp Feature: gene Location: 20952-21821 bp Feature: gene Location: 21840-22325 bp Feature: domain Description: PrgI Location: 21855-22128 bp Feature: domain Description: PrgI Location: 21855-22128 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RAYA01004359.1 (534 bp)
Overview 1 RT 1: 2-533 bp Neighborhood of RT #1 [2, 532] RVT-GII Feature: gene Location: 2-532 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-533 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-533 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RAYA01001414.1 (655 bp)
Overview 1 RT 1: 1-655 bp Neighborhood of RT #1 [1, 654] RVT-GII Feature: gene Location: 1-654 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-655 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-655 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RAYA01000753.1 (2240 bp)
Overview 1 RT 1: 126-1948 bp Neighborhood of RT #1 [126, 1948] RVT-GII GIIM GIIM Feature: gene Location: 126-1574 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 354-981 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 354-981 bp Feature: domain Description: GIIM Note: maturase Location: 1056-1167 bp Feature: domain Description: GIIM Note: maturase Location: 1056-1167 bp Feature: domain Description: GIIM Note: maturase Location: 1251-1344 bp Feature: domain Description: GIIM Note: maturase Location: 12 51-1344 bp Feature: gene Location: 1637-1948 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RAYA01000031.1 (50056 bp)
Overview 1 RT 1: 42673-45689 bp Neighborhood of RT #1 [42673, 45689] RVT-DGRs ChiA1_BD ChiA1_BD Feature: gene Location: 42673-43137 bp Feature: gene Location: 43166-43495 bp Feature: gene Location: 43545-44708 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 43824-44439 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 43824-44439 bp Feature: gene Location: 44681-45301 bp Feature: domain Description: ChiA1_BD Location: 44996-45119 bp Feature: domain Description: ChiA1_BD Location: 44996-45119 bp Feature: domain Description: ChiA1_BD Location: 45182-45260 bp Feature: domain Description: ChiA1_BD Location: 45182-45260 bp Feature: gene Location: 45291-45689 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RAYA01001658.1 (1260 bp)
Overview 1 RT 1: 679-1249 bp Neighborhood of RT #1 [679, 1257] RVT-GII Feature: gene Location: 679-1257 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 904-1249 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 904-1249 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RAYA01000838.1 (2053 bp)
Overview 1 RT 1: 81-2050 bp Neighborhood of RT #1 [81, 2050] RVT-GII GIIM Feature: gene Location: 81-1406 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 348-972 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 348-972 bp Feature: domain Description: GIIM Note: maturase Location: 1017-1248 bp Feature: domain Description: GIIM Note: maturase Location: 1017-1248 bp Feature: gene Location: 1907-2050 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RAYA01000099.1 (17965 bp)
Overview 1 RT 1: 9503-13046 bp Neighborhood of RT #1 [9503, 13046] RVT-Retrons ThiF Feature: gene Location: 9503-9826 bp Feature: gene Location: 9843-10112 bp Feature: gene Location: 10121-11353 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 10487-11060 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 10487-11060 bp Feature: gene Location: 11624-12313 bp Feature: domain Description: ThiF Location: 11675-12242 bp Feature: domain Description: ThiF Location: 116 75-12242 bp Feature: gene Location: 12327-13046 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RAYA01000004.1 (87354 bp)
Overview 1 RT 1: 1021-8710 bp Neighborhood of RT #1 [1021, 8733] PrgI VirB4_CagE RVT_N RVT-GII GIIM HNH TraC-F-type Spr Feature: gene Location: 1021-1416 bp Feature: domain Description: PrgI Location: 1033-1306 bp Feature: domain Description: PrgI Location: 1033-1306 bp Feature: gene Location: 1406-2851 bp Feature: domain Description: VirB4_CagE Location: 2081-2753 bp Feature: domain Description: VirB4_CagE Location: 2081-2753 bp Feature: gene Location: 3386-5065 bp Feature: domain Description: RVT_N Location: 3464-3704 bp Feature: domain Description: RVT_N Location: 3464-3704 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3752-4412 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3752-4412 bp Feature: domain Description: GIIM Note: maturase Location: 4466-4700 bp Feature: domain Description: GIIM Note: maturase Location: 4466-4700 bp Feature: domain Description: HNH Note: nucleases Location: 4913-5030 bp Feature: domain Description: HNH Note: nucleases Location: 4913-5030 bp Feature: gene Location: 5070-6062 bp Feature: domain Description: TraC-F-type Location: 5154-5937 bp Feature: domain Description: TraC-F-type Location: 5154-5937 bp Feature: gene Location: 6049-8733 bp Feature: domain Description: Spr Location: 8371-8710 bp Feature: domain Description: Spr Location: 8371-8710 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RAYA01002005.1 (1087 bp)
Overview 1 RT 1: 2-974 bp Neighborhood of RT #1 [2, 1084] RVT-GII Intron_maturas2 Feature: gene Location: 2-1084 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 218-425 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 218 -425 bp Feature: domain Description: Intron_maturas2 Location: 533-974 bp Feature: domain Description: Intron_maturas2 Location: 533-974 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RAYA01000085.1 (21388 bp)
Overview 1 RT 1: 3492-7356 bp Neighborhood of RT #1 [3492, 7388] RVT-GII Intron_maturas2 HNHc LytT Feature: gene Location: 3492-3770 bp Feature: gene Location: 3894-4127 bp Feature: gene Location: 4214-6082 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4508-5330 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4508-5330 bp Feature: domain Description: Intron_maturas2 Location: 5399-5705 bp Feature: domain Description: Intron_maturas2 Location: 5399-5705 bp Feature: domain Description: HNHc Note: nucleases Location: 5879-6029 bp Feature: domain Description: HNHc Note: nucleases Location: 5879-6029 bp Feature: gene Location: 6270-6593 bp Feature: gene Location: 6672-7388 bp Feature: domain Description: LytT Location: 6675-7356 bp Feature: domain Description: LytT Location: 6675-7356 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RAYA01000288.1 (4676 bp)
Overview 1 RT 1: 773-4005 bp Neighborhood of RT #1 [773, 4005] HTH_32 Zn_ribbon_recom RVT-GII GIIM RVT_N RVT-GII Feature: gene Location: 773-1216 bp Feature: domain Description: HTH_32 Location: 797-968 bp Feature: domain Description: HTH_32 Location: 797-968 bp Feature: gene Location: 1491-1718 bp Feature: domain Description: Zn_ribbon_recom Location: 1506-1632 bp Feature: domain Description: Zn_ribbon_recom Location: 1506-1632 bp Feature: gene Location: 2002-2751 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2005-2260 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20 05-2260 bp Feature: domain Description: GIIM Note: maturase Location: 2314-2545 bp Feature: domain Description: GIIM Note: maturase Location: 2314-2545 bp Feature: gene Location: 2842-3474 bp Feature: domain Description: RVT_N Location: 2887-3130 bp Feature: domain Description: RVT_N Location: 2887-3130 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3175-3469 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3175-3469 bp Feature: gene Location: 3527-3700 bp Feature: gene Location: 3751-4005 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RAYA01004444.1 (524 bp)
Overview 1 RT 1: 1-517 bp Neighborhood of RT #1 [1, 522] RVT-GII Feature: gene Location: 1-522 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-517 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-517 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT

Seq: RAYA01003291.1 (695 bp)
Overview 1 RT 1: 2-683 bp Neighborhood of RT #1 [2, 694] RVT-GII Feature: gene Location: 2-694 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 251-683 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 251-683 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT