myRT

myRT report for GCA_003671475.1_ASM367147v1

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Seq: RCHM01000009.1 (766857 bp)
Overview 1 RT 1: 711546-721065 bp Neighborhood of RT #1 [711546, 721091] COG0610 PDDEXK_4 RVT-UG5 RMtype1_S_Eco4255III-TRD2-CR2_like RMtype1_S_Eco4255III-TRD2-CR2_like dinD Feature: gene Location: 711546-714851 bp Feature: domain Description: COG0610 Location: 711573-714678 bp Feature: domain Description: COG061 0 Location: 71 1 573-71 4678 bp Feature: gene Location: 714904-715989 bp Feature: domain Description: PDDEXK_4 Location: 714982-715408 bp Feature: domain Description: PDDEXK_4 Location: 71 4982-71 5408 bp Feature: gene Location: 716005-718962 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 716512-716968 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 71 651 2-71 6968 bp Feature: gene Location: 718973-720154 bp Feature: domain Description: RMtype1_S_Eco4255III-TRD2-CR2_like Location: 719315-719519 bp Feature: domain Description: RMtype1 _S_Eco4255III-TRD2-CR2_like Location: 71 931 5-71 951 9 bp Feature: domain Description: RMtype1_S_Eco4255III-TRD2-CR2_like Location: 719585-720128 bp Feature: domain Description: RMtype1 _S_Eco4255III-TRD2-CR2_like Location: 71 9585-7201 28 bp Feature: gene Location: 720243-721091 bp Feature: domain Description: dinD Location: 720264-721065 bp Feature: domain Description: dinD Location: 720264-721 065 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG0610 (Type I site-specific restriction-modification system, R (restriction) subunit and related helicases ), PDDEXK_4 (pfam14281), RVT-UG5, RMtype1_S_Eco4255III-TRD2-CR2_like (cd17265), dinD (PRK11525)

Seq: RCHM01000046.1 (344143 bp)
Overview 1 RT 1: 253065-260969 bp Neighborhood of RT #1 [253065, 261640] GT4_PimA-like Peptidase_C14 PRK02362 RVT-UG12 COG4933 PIN_VapC_like Acetyltransf_1 Feature: gene Location: 253065-254333 bp Feature: domain Description: GT4_PimA-like Location: 253089-254181 bp Feature: domain Description: GT4_PimA-like Location: 2 53089-2 54181 bp Feature: gene Location: 254683-257694 bp Feature: domain Description: Peptidase_C14 Location: 254695-255283 bp Feature: domain Description: Peptidase_C14 Location: 2 54695-2 552 83 bp Feature: domain Description: PRK02362 Location: 255547-257656 bp Feature: domain Description: PRK02 362 Location: 2 55547-2 57656 bp Feature: gene Location: 257821-259491 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 258280-258712 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 2 582 80-2 58712 bp Feature: gene Location: 259638-260084 bp Feature: domain Description: COG4933 Location: 259689-260052 bp Feature: domain Description: COG4933 Location: 2 59689-2 60052 bp Feature: gene Location: 260117-261640 bp Feature: domain Description: PIN_VapC_like Location: 260123-260486 bp Feature: domain Description: PIN_VapC_like Location: 2 6012 3-2 60486 bp Feature: domain Description: Acetyltransf_1 Location: 260615-260969 bp Feature: domain Description: Acetyltransf_1 Location: 2 60615-2 60969 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GT4_PimA-like (cd03801), Peptidase_C14 (pfam00656), PRK02362 (ATP-dependent DNA helicase), RVT-UG12, COG4933 (Predicted transcriptional regulator, contains an HTH and PUA-like domains ), PIN_VapC_like (cd18702), Acetyltransf_1 (pfam00583)

Seq: RCHM01000032.1 (252809 bp)
Overview 1 RT 1: 152262-156240 bp Neighborhood of RT #1 [152262, 156257] ACAD KOG3182 RVT-Retrons DUF4234 Feature: gene Location: 152262-153425 bp Feature: domain Description: ACAD Location: 152298-153387 bp Feature: domain Description: ACAD Location: 152298-153 3 87 bp Feature: gene Location: 153595-154137 bp Feature: domain Description: KOG3182 Location: 153616-154111 bp Feature: domain Description: KOG3 182 Location: 153 616-154111 bp Feature: gene Location: 154172-155488 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 154625-155255 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 154625-155255 bp Feature: gene Location: 155528-155794 bp Feature: gene Location: 155778-156257 bp Feature: domain Description: DUF4234 Location: 155862-156240 bp Feature: domain Description: DUF423 4 Location: 155862-156240 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ACAD (cl09933), KOG3182 (KOG3182, Predicted cation transporter ), RVT-Retrons, DUF4234 (pfam14018)