myRT

myRT report for GCA_003671815.1_ASM367181v1

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Seq: RCHO01000013.1 (175103 bp)
Overview 1 RT 1: 6184-14607 bp Neighborhood of RT #1 [6184, 14759] PIN_VapC_like Acetyltransf_1 RVT-UG12 Peptidase_C14 PRK02362 GT4_PimA-like Feature: gene Location: 6184-7743 bp Feature: domain Description: PIN_VapC_like Location: 6205-6589 bp Feature: domain Description: PIN_VapC_like Location: 6205-6589 bp Feature: domain Description: Acetyltransf_1 Location: 6718-7072 bp Feature: domain Description: Acetyltransf_1 Location: 671 8-7072 bp Feature: gene Location: 8062-8274 bp Feature: gene Location: 8333-10003 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 8792-9224 bp Feature: RT Description: RVT-UG1 2 Note: UG1 2 RT Location: 8792-9224 bp Feature: gene Location: 10130-13141 bp Feature: domain Description: Peptidase_C14 Location: 10142-10730 bp Feature: domain Description: Peptidase_C1 4 Location: 1 01 42-1 0730 bp Feature: domain Description: PRK02362 Location: 10994-13103 bp Feature: domain Description: PRK02362 Location: 1 0994-1 31 03 bp Feature: gene Location: 13491-14759 bp Feature: domain Description: GT4_PimA-like Location: 13515-14607 bp Feature: domain Description: GT4_PimA-like Location: 1 351 5-1 4607 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PIN_VapC_like (cd18702), Acetyltransf_1 (pfam00583), RVT-UG12, Peptidase_C14 (pfam00656), PRK02362 (ATP-dependent DNA helicase), GT4_PimA-like (cd03801)

Seq: RCHO01000008.1 (280145 bp)
Overview 1 RT 1: 123384-127857 bp Neighborhood of RT #1 [123384, 127895] SRPBCC_CalC_Aha1-like_3 DUF4234 RVT-Retrons KOG3182 ACAD Feature: gene Location: 123384-123869 bp Feature: domain Description: SRPBCC_CalC_Aha1-like_3 Location: 123438-123861 bp Feature: domain Description: SRPBCC_CalC_Aha1-like_3 Location: 12 3438-12 3861 bp Feature: gene Location: 123900-124379 bp Feature: domain Description: DUF4234 Location: 123984-124362 bp Feature: domain Description: DUF42 34 Location: 12 3984-12 4362 bp Feature: gene Location: 124669-125985 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 125122-125752 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 12 512 2 -12 5752 bp Feature: gene Location: 126020-126562 bp Feature: domain Description: KOG3182 Location: 126041-126536 bp Feature: domain Description: KOG3182 Location: 12 6041-12 6536 bp Feature: gene Location: 126732-127895 bp Feature: domain Description: ACAD Location: 126768-127857 bp Feature: domain Description: ACAD Location: 12 6768-12 7857 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SRPBCC_CalC_Aha1-like_3 (cd08896), DUF4234 (pfam14018), RVT-Retrons, KOG3182 (KOG3182, Predicted cation transporter ), ACAD (cl09933)

Seq: RCHO01000007.1 (302948 bp)
Overview 1 RT 1: 45043-54415 bp Neighborhood of RT #1 [45043, 54588] dinD RMtype1_S_Eco4255III-TRD2-CR2_like RMtype1_S_Eco4255III-TRD2-CR2_like RVT-UG5 PDDEXK_4 COG0610 Feature: gene Location: 45043-45891 bp Feature: domain Description: dinD Location: 45064-45865 bp Feature: domain Description: dinD Location: 45064-45865 bp Feature: gene Location: 45980-47161 bp Feature: domain Description: RMtype1_S_Eco4255III-TRD2-CR2_like Location: 46322-46526 bp Feature: domain Description: RMtype1_S_Eco4255III-TRD2-CR2_like Location: 463 22-46526 bp Feature: domain Description: RMtype1_S_Eco4255III-TRD2-CR2_like Location: 46592-47135 bp Feature: domain Description: RMtype1_S_Eco4255III-TRD2-CR2_like Location: 46592-4713 5 bp Feature: gene Location: 47172-50129 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 47679-48135 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 47679-4813 5 bp Feature: gene Location: 50145-51230 bp Feature: domain Description: PDDEXK_4 Location: 50223-50649 bp Feature: domain Description: PDDEXK_4 Location: 50223 -50649 bp Feature: gene Location: 51283-54588 bp Feature: domain Description: COG0610 Location: 51310-54415 bp Feature: domain Description: COG0610 Location: 513 10-54415 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dinD (PRK11525), RMtype1_S_Eco4255III-TRD2-CR2_like (cd17265), RVT-UG5, PDDEXK_4 (pfam14281), COG0610 (Type I site-specific restriction-modification system, R (restriction) subunit and related helicases )