myRT

myRT report for GCA_003671855.1_ASM367185v1

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Seq: RAZM01000112.1 (9996 bp)
Overview 1 RT 1: 6992-9385 bp Neighborhood of RT #1 [6992, 9741] PRK07983 PRK07983 RVT-G2Lc Feature: gene Location: 6992-7645 bp Feature: domain Description: PRK07983 Location: 7343-7427 bp Feature: domain Description: PRK07983 Location: 7343-7427 bp Feature: domain Description: PRK07983 Location: 7514-7604 bp Feature: domain Description: PRK07983 Location: 751 4-7604 bp Feature: gene Location: 7663-8232 bp Feature: gene Location: 8536-9741 bp Feature: RT Description: RVT-G2Lc Note: G2Lc RT Location: 8722-9385 bp Feature: RT Description: RVT-G2Lc Note: G2Lc RT Location: 8722-9385 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK07983 (exodeoxyribonuclease X; Provisional), RVT-G2Lc

Seq: RAZM01000034.1 (41904 bp)
Overview 1 RT 1: 12886-18477 bp Neighborhood of RT #1 [12886, 18833] RVT-DGRs SMC_prok_B Feature: gene Location: 12886-13638 bp Feature: gene Location: 13872-14246 bp Feature: gene Location: 14256-15599 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 14463-15054 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 14463-15054 bp Feature: gene Location: 16097-17566 bp Feature: gene Location: 17580-18833 bp Feature: domain Description: SMC_prok_B Location: 17709-18477 bp Feature: domain Description: SMC_prok_B Location: 17709-18477 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, SMC_prok_B (TIGR02168)

Seq: RAZM01000016.1 (75265 bp)
Overview 1 RT 1: 66506-70038 bp Neighborhood of RT #1 [66506, 70038] DUF1566 Avd_like RVT-DGRs Feature: gene Location: 66506-67315 bp Feature: domain Description: DUF1566 Location: 67037-67286 bp Feature: domain Description: DUF1566 Location: 6703 7-67286 bp Feature: gene Location: 67462-67869 bp Feature: domain Description: Avd_like Location: 67495-67804 bp Feature: domain Description: Avd_like Location: 67495-67804 bp Feature: gene Location: 67884-69305 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 68259-68961 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 68259-68961 bp Feature: gene Location: 69268-69546 bp Feature: gene Location: 69745-70038 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1566 (pfam07603), Avd_like (cd16376), RVT-DGRs

Seq: RAZM01000164.1 (1905 bp)
Overview 1 RT 1: 81-1903 bp Neighborhood of RT #1 [81, 1903] GIIM RVT-GII Feature: gene Location: 81-551 bp Feature: domain Description: GIIM Note: maturase Location: 234-441 bp Feature: domain Description: GIIM Note: maturase Location: 234 -4 4 1 bp Feature: gene Location: 436-1350 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 649-1306 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 64 9-1306 bp Feature: gene Location: 1373-1606 bp Feature: gene Location: 1667-1903 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GIIM (pfam08388), RVT-GII

Seq: RAZM01000005.1 (113235 bp)
Overview 1 RT 1: 5124-8639 bp Neighborhood of RT #1 [5124, 8671] ZapB RVT-DGRs HTH_XRE Gp49 Feature: gene Location: 5124-5483 bp Feature: domain Description: ZapB Location: 5316-5427 bp Feature: domain Description: ZapB Location: 5 316-5 427 bp Feature: gene Location: 5700-6206 bp Feature: gene Location: 6274-7764 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 6667-7264 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 6667-7264 bp Feature: gene Location: 8011-8322 bp Feature: domain Description: HTH_XRE Location: 8125-8278 bp Feature: domain Description: HTH_XRE Location: 8125 -8278 bp Feature: gene Location: 8327-8671 bp Feature: domain Description: Gp49 Location: 8381-8639 bp Feature: domain Description: Gp49 Location: 8381-8639 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ZapB (pfam06005), RVT-DGRs, HTH_XRE (smart00530), Gp49 (pfam05973)

Seq: RAZM01000012.1 (86294 bp)
Overview 1 RT 1: 23023-27725 bp Neighborhood of RT #1 [23023, 27725] RVT-DGRs Feature: gene Location: 23023-24519 bp Feature: gene Location: 24739-25095 bp Feature: gene Location: 25102-26463 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 25306-25900 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 25306 -25900 bp Feature: gene Location: 26476-26847 bp Feature: gene Location: 26859-27725 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: RAZM01000081.1 (19435 bp)
Overview 1 RT 1: 108-9673 bp Neighborhood of RT #1 [108, 9678] RVT-GII PRK00566 rpoB Feature: gene Location: 108-1001 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 432-996 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 432-996 bp Feature: gene Location: 1477-5760 bp Feature: domain Description: PRK00566 Location: 1498-5719 bp Feature: domain Description: PRK00566 Location: 1498-57 19 bp Feature: gene Location: 5866-9678 bp Feature: domain Description: rpoB Location: 5887-9673 bp Feature: domain Description: rpoB Location: 5887 -967 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK00566 (DNA-directed RNA polymerase subunit beta'; Provisional), rpoB (TIGR02013)

Seq: RAZM01000126.1 (6356 bp)
Overview 1 RT 1: 459-3322 bp Neighborhood of RT #1 [459, 3322] group_II_RT_mat RVT-GII CcmA Feature: gene Location: 459-671 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 537-660 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 537-660 bp Feature: gene Location: 661-1452 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 706-1321 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 706-1321 bp Feature: gene Location: 1640-2485 bp Feature: domain Description: CcmA Location: 1646-2330 bp Feature: domain Description: CcmA Location: 1646-2330 bp Feature: gene Location: 2492-3322 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), RVT-GII, CcmA (COG4133)

Seq: RAZM01000001.1 (188917 bp)
Overview 1 RT 1: 58917-69238 bp 2 RT 2: 108914-112585 bp Neighborhood of RT #1 [58917, 69249] DUF1566 RVT-DGRs Avd_like DUF1566 Neighborhood of RT #2 [108914, 112585] MRP-L20 RVT-UG27 Feature: gene Location: 58917-60875 bp Feature: gene Location: 60938-61291 bp Feature: gene Location: 61282-62703 bp Feature: domain Description: DUF1566 Location: 61354-61498 bp Feature: domain Description: DUF1566 Location: 61354-6149 8 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 61687-62425 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 61687-62425 bp Feature: gene Location: 62716-63117 bp Feature: domain Description: Avd_like Location: 62755-63094 bp Feature: domain Description: Avd_like Location: 62755-6309 4 bp Feature: gene Location: 63247-69249 bp Feature: domain Description: DUF1566 Location: 68935-69238 bp Feature: domain Description: DUF1566 Location: 689 35-69 238 bp Feature: gene Location: 108914-109531 bp Feature: gene Location: 109608-109838 bp Feature: domain Description: MRP-L20 Location: 109632-109800 bp Feature: domain Description: MRP-L20 Location: 109 632-109 800 bp Feature: gene Location: 109835-111103 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 110024-110660 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 110024-110660 bp Feature: gene Location: 111420-111647 bp Feature: gene Location: 111989-112585 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1566 (pfam07603), RVT-DGRs, Avd_like (cd16376), MRP-L20 (pfam12824), RVT-UG27

Seq: RAZM01000013.1 (85596 bp)
Overview 1 RT 1: 47167-51044 bp Neighborhood of RT #1 [47167, 51049] DUF3791 RVT-GII GIIM TIGR00043 SpmA SpmB Feature: gene Location: 47167-47382 bp Feature: domain Description: DUF3791 Location: 47188-47368 bp Feature: domain Description: DUF3791 Location: 47188-47368 bp Feature: gene Location: 47511-47639 bp Feature: gene Location: 47808-49214 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48150-48768 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48150-48768 bp Feature: domain Description: GIIM Note: maturase Location: 48825-49053 bp Feature: domain Description: GIIM Note: maturase Location: 48825-49053 bp Feature: gene Location: 49381-49800 bp Feature: domain Description: TIGR00043 Location: 49492-49789 bp Feature: domain Description: TIGR00043 Location: 49492-49789 bp Feature: gene Location: 49817-51049 bp Feature: domain Description: SpmA Location: 49826-50426 bp Feature: domain Description: SpmA Location: 49826-50426 bp Feature: domain Description: SpmB Location: 50561-51044 bp Feature: domain Description: SpmB Location: 50561-510 44 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3791 (pfam12668), RVT-GII, GIIM (pfam08388), TIGR00043 (rRNA maturation RNase YbeY), SpmA (COG2715), SpmB (COG0700)