myRT

myRT report for GCA_003686425.1_ASM368642v1

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Seq: RDCZ01000079.1 (7758 bp)
Overview 1 RT 1: 3-3321 bp Neighborhood of RT #1 [3, 3321] PRK11447 RAYT RVT-GII Feature: gene Location: 3-200 bp Feature: domain Description: PRK11447 Location: 6-201 bp Feature: domain Description: PRK1 1 447 Location: 6-201 bp Feature: gene Location: 547-1086 bp Feature: domain Description: RAYT Location: 625-988 bp Feature: domain Description: RAYT Location: 625-988 bp Feature: gene Location: 1531-2586 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1819-2437 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 81 9-2437 bp Feature: gene Location: 2617-2814 bp Feature: gene Location: 3178-3321 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK11447 (cellulose synthase subunit BcsC; Provisional), RAYT (COG1943), RVT-GII

Seq: RDCZ01000033.1 (40322 bp)
Overview 1 RT 1: 21915-27670 bp Neighborhood of RT #1 [21915, 27670] PRK09692 RVT-UG3 RVT-UG8 Feature: gene Location: 21915-22067 bp Feature: gene Location: 22343-23527 bp Feature: domain Description: PRK09692 Location: 22349-23501 bp Feature: domain Description: PRK09692 Location: 2 2 349-2 3501 bp Feature: gene Location: 23706-24989 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 23994-24501 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 2 3994-2 4501 bp Feature: gene Location: 24986-26947 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 25505-25952 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 2 5505-2 5952 bp Feature: gene Location: 27291-27458 bp Feature: gene Location: 27509-27670 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), RVT-UG3, RVT-UG8

Seq: RDCZ01000050.1 (29779 bp)
Overview 1 RT 1: 116-4014 bp Neighborhood of RT #1 [116, 4130] PHA02517 RVT-GII GIIM PHA02517 COG3547 Feature: gene Location: 116-397 bp Feature: domain Description: PHA02517 Location: 122-332 bp Feature: domain Description: PHA02517 Location: 122-3 3 2 bp Feature: gene Location: 989-2512 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1262-1994 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1262-1994 bp Feature: domain Description: GIIM Note: maturase Location: 2069-2267 bp Feature: domain Description: GIIM Note: maturase Location: 2069-2267 bp Feature: gene Location: 2635-2835 bp Feature: domain Description: PHA02517 Location: 2638-2800 bp Feature: domain Description: PHA02517 Location: 263 8-2800 bp Feature: gene Location: 3054-4130 bp Feature: domain Description: COG3547 Location: 3093-4014 bp Feature: domain Description: COG3 547 Location: 3 093 -4014 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), COG3547 (Transposase )

Seq: RDCZ01000027.1 (45413 bp)
Overview 1 RT 1: 13494-18077 bp Neighborhood of RT #1 [13494, 18340] RVT-GII Inovirus_Gp2 DUF3987 Feature: gene Location: 13494-13667 bp Feature: gene Location: 13701-14009 bp Feature: gene Location: 13996-15159 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14110-14788 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14 110-14 788 bp Feature: gene Location: 15485-16048 bp Feature: domain Description: Inovirus_Gp2 Location: 15542-15983 bp Feature: domain Description: Inovirus_Gp2 Location: 1554 2-15983 bp Feature: gene Location: 16907-18340 bp Feature: domain Description: DUF3987 Location: 17000-18077 bp Feature: domain Description: DUF3987 Location: 17000-18077 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Inovirus_Gp2 (pfam11726), DUF3987 (pfam13148)