myRT

myRT report for GCA_003693385.1_ASM369338v1

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Seq: RDRT01000002.1 (2666881 bp)
Overview 1 RT 1: 2279511-2284399 bp 2 RT 2: 2438348-2444810 bp 3 RT 3: 2507244-2511174 bp 4 RT 4: 2572039-2578158 bp 5 RT 5: 2585871-2590767 bp Neighborhood of RT #1 [2279511, 2284548] HpaI RVT-GII DDE_Tnp_IS66 DDE_Tnp_IS66 Neighborhood of RT #2 [2438348, 2444836] RVT_N RVT-GII Resolvase Recombinase Zn_ribbon_recom RVT-GII GIIM COG3547 COG3547 Rve Neighborhood of RT #3 [2507244, 2511174] Rve COG3547 COG3547 RVT-GII GIIM RVT_N RVT-GII Neighborhood of RT #4 [2572039, 2578158] Rve RVT_N RVT-GII RVT-GII GIIM COG3547 COG3547 Rve RVT-GII GIIM DUF5372 Neighborhood of RT #5 [2585871, 2590787] PinE Zn_ribbon_recom Recombinase Zn_ribbon_recom HTH_17 RVT-GII Rve Feature: gene Location: 2279511-2280299 bp Feature: domain Description: HpaI Location: 2279544-2280285 bp Feature: domain Description: HpaI Location: 2279544-2280285 bp Feature: gene Location: 2280426-2280752 bp Feature: gene Location: 2281306-2282589 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2281534-2282221 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2281 534-2282221 bp Feature: gene Location: 2282737-2282916 bp Feature: gene Location: 2282929-2284548 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2283412-2283796 bp Feature: domain Description: DDE_Tnp_IS66 Location: 228341 2-2283796 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2284018-2284399 bp Feature: domain Description: DDE_Tnp_IS66 Location: 228401 8-2284399 bp Feature: gene Location: 2438348-2438572 bp Feature: gene Location: 2438859-2439107 bp Feature: gene Location: 2439123-2439869 bp Feature: domain Description: RVT_N Location: 2439192-2439435 bp Feature: domain Description: RVT_N Location: 24391 92-2439435 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2439480-2439858 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2439480-2439858 bp Feature: gene Location: 2440000-2440185 bp Feature: gene Location: 2440182-2441906 bp Feature: domain Description: Resolvase Location: 2440203-2440641 bp Feature: domain Description: Resolvase Location: 2440203-2440641 bp Feature: domain Description: Recombinase Location: 2440737-2441100 bp Feature: domain Description: Recombinase Location: 2440737-2441 1 00 bp Feature: domain Description: Zn_ribbon_recom Location: 2441145-2441349 bp Feature: domain Description: Zn_ribbon_recom Location: 2441 1 45-2441 349 bp Feature: gene Location: 2441887-2442645 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2441890-2442139 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2441 890-24421 39 bp Feature: domain Description: GIIM Note: maturase Location: 2442190-2442424 bp Feature: domain Description: GIIM Note: maturase Location: 24421 90-2442424 bp Feature: gene Location: 2442944-2444290 bp Feature: domain Description: COG3547 Location: 2442998-2443397 bp Feature: domain Description: COG3547 Location: 2442998-2443397 bp Feature: domain Description: COG3547 Location: 2443715-2444132 bp Feature: domain Description: COG3547 Location: 244371 5-24441 32 bp Feature: gene Location: 2444363-2444836 bp Feature: domain Description: Rve Location: 2444390-2444810 bp Feature: domain Description: Rve Location: 2444390-244481 0 bp Feature: gene Location: 2507244-2507417 bp Feature: domain Description: Rve Location: 2507259-2507391 bp Feature: domain Description: Rve Location: 2507259-2507391 bp Feature: gene Location: 2507490-2508836 bp Feature: domain Description: COG3547 Location: 2507544-2507943 bp Feature: domain Description: COG3547 Location: 2507544-2507943 bp Feature: domain Description: COG3547 Location: 2508261-2508678 bp Feature: domain Description: COG3547 Location: 2508261 -2508678 bp Feature: gene Location: 2509135-2509893 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2509138-2509387 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25091 38-2509387 bp Feature: domain Description: GIIM Note: maturase Location: 2509438-2509672 bp Feature: domain Description: GIIM Note: maturase Location: 2509438-2509672 bp Feature: gene Location: 2509874-2510641 bp Feature: domain Description: RVT_N Location: 2509943-2510186 bp Feature: domain Description: RVT_N Location: 2509943-251 01 86 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2510231-2510597 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 251 0231 -251 0597 bp Feature: gene Location: 2510657-2510929 bp Feature: gene Location: 2510977-2511174 bp Feature: gene Location: 2572039-2572380 bp Feature: domain Description: Rve Location: 2572105-2572291 bp Feature: domain Description: Rve Location: 25721 05-2572291 bp Feature: gene Location: 2572649-2572897 bp Feature: gene Location: 2572913-2573680 bp Feature: domain Description: RVT_N Location: 2572982-2573225 bp Feature: domain Description: RVT_N Location: 2572982-2573225 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2573270-2573636 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2573270-2573636 bp Feature: gene Location: 2573661-2574419 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2573664-2573913 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2573664-257391 3 bp Feature: domain Description: GIIM Note: maturase Location: 2573964-2574198 bp Feature: domain Description: GIIM Note: maturase Location: 2573964-25741 98 bp Feature: gene Location: 2574718-2576064 bp Feature: domain Description: COG3547 Location: 2574772-2575171 bp Feature: domain Description: COG3547 Location: 2574772-25751 71 bp Feature: domain Description: COG3547 Location: 2575489-2575906 bp Feature: domain Description: COG3547 Location: 2575489-2575906 bp Feature: gene Location: 2576137-2576292 bp Feature: domain Description: Rve Location: 2576140-2576263 bp Feature: domain Description: Rve Location: 25761 40-2576263 bp Feature: gene Location: 2576443-2577441 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2576449-2577055 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2576449-2577055 bp Feature: domain Description: GIIM Note: maturase Location: 2577136-2577358 bp Feature: domain Description: GIIM Note: maturase Location: 25771 36-2577358 bp Feature: gene Location: 2577486-2577773 bp Feature: domain Description: DUF5372 Location: 2577504-2577735 bp Feature: domain Description: DUF5372 Location: 2577504-2577735 bp Feature: gene Location: 2577826-2578158 bp Feature: gene Location: 2585871-2587994 bp Feature: domain Description: PinE Location: 2585991-2586621 bp Feature: domain Description: PinE Location: 2585991 -2586621 bp Feature: domain Description: Zn_ribbon_recom Location: 2586915-2587071 bp Feature: domain Description: Zn_ribbon_recom Location: 258691 5-2587071 bp Feature: gene Location: 2588067-2589719 bp Feature: domain Description: Recombinase Location: 2588226-2588586 bp Feature: domain Description: Recombinase Location: 2588226-2588586 bp Feature: domain Description: Zn_ribbon_recom Location: 2588643-2588820 bp Feature: domain Description: Zn_ribbon_recom Location: 2588643-2588820 bp Feature: domain Description: HTH_17 Location: 2589516-2589609 bp Feature: domain Description: HTH_1 7 Location: 258951 6-2589609 bp Feature: gene Location: 2589728-2589994 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2589941-2589986 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2589941 -2589986 bp Feature: gene Location: 2590296-2590535 bp Feature: gene Location: 2590623-2590787 bp Feature: domain Description: Rve Location: 2590650-2590767 bp Feature: domain Description: Rve Location: 2590650-2590767 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HpaI (TIGR02311), RVT-GII, DDE_Tnp_IS66 (pfam03050), RVT_N (pfam13655), Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), GIIM (pfam08388), COG3547 (Transposase ), Rve (COG3316)
DUF5372 (pfam17342), PinE (COG1961), HTH_17 (pfam12728)

Seq: RDRT01000005.1 (342633 bp)
Overview 1 RT 1: 184922-190363 bp 2 RT 2: 207428-212204 bp 3 RT 3: 264187-268765 bp Neighborhood of RT #1 [184922, 190363] INT_XerDC_C PRK06850 RVT-GII GIIM Neighborhood of RT #2 [207428, 212227] TniQ RVT-GII GIIM DUF3562 Neighborhood of RT #3 [264187, 268806] COG3547 RVT_N RVT-GII GIIM Phage_int_SAM_1 INT_RitC_C_like INT_RitB_C_like Feature: gene Location: 184922-185581 bp Feature: domain Description: INT_XerDC_C Location: 184952-185528 bp Feature: domain Description: INT_XerDC_C Location: 184952 -18552 8 bp Feature: gene Location: 185791-187599 bp Feature: domain Description: PRK06850 Location: 185836-186736 bp Feature: domain Description: PRK06850 Location: 185836-186736 bp Feature: gene Location: 187704-189071 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 188034-188652 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 188034-188652 bp Feature: domain Description: GIIM Note: maturase Location: 188703-188913 bp Feature: domain Description: GIIM Note: maturase Location: 188703-188913 bp Feature: gene Location: 189536-189901 bp Feature: gene Location: 190061-190363 bp Feature: gene Location: 207428-208603 bp Feature: gene Location: 208623-209201 bp Feature: domain Description: TniQ Location: 208722-209094 bp Feature: domain Description: TniQ Location: 2 0872 2 -2 09094 bp Feature: gene Location: 209939-211207 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 210188-210851 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 10188-2 10851 bp Feature: domain Description: GIIM Note: maturase Location: 210920-211136 bp Feature: domain Description: GIIM Note: maturase Location: 2 1092 0-2 11136 bp Feature: gene Location: 211442-211864 bp Feature: gene Location: 212027-212227 bp Feature: domain Description: DUF3562 Location: 212036-212204 bp Feature: domain Description: DUF3562 Location: 2 12 036-2 12 2 04 bp Feature: gene Location: 264187-265359 bp Feature: domain Description: COG3547 Location: 264289-265240 bp Feature: domain Description: COG3547 Location: 2 642 89-2 652 40 bp Feature: gene Location: 264973-265272 bp Feature: gene Location: 265350-266696 bp Feature: domain Description: RVT_N Location: 265356-265497 bp Feature: domain Description: RVT_N Location: 2 65356-2 65497 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 265548-266190 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 65548-2 66190 bp Feature: domain Description: GIIM Note: maturase Location: 266241-266475 bp Feature: domain Description: GIIM Note: maturase Location: 2 662 41-2 66475 bp Feature: gene Location: 266819-267838 bp Feature: domain Description: Phage_int_SAM_1 Location: 266870-267119 bp Feature: domain Description: Phage_int_SAM_1 Location: 2 66870-2 67119 bp Feature: domain Description: INT_RitC_C_like Location: 267209-267758 bp Feature: domain Description: INT_RitC_C_like Location: 2 672 09-2 67758 bp Feature: gene Location: 267835-268806 bp Feature: domain Description: INT_RitB_C_like Location: 268168-268765 bp Feature: domain Description: INT_RitB_C_like Location: 2 68168-2 68765 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_XerDC_C (cd00798), PRK06850 (hypothetical protein; Provisional), RVT-GII, GIIM (pfam08388), TniQ (pfam06527), DUF3562 (pfam12085), COG3547 (Transposase ), RVT_N (pfam13655), Phage_int_SAM_1 (pfam02899), INT_RitC_C_like (cd01182)
INT_RitB_C_like (cd00797)

Seq: RDRT01000003.1 (2535144 bp)
Overview 1 RT 1: 881809-885925 bp 2 RT 2: 2382534-2389118 bp 3 RT 3: 2438638-2445036 bp Neighborhood of RT #1 [881809, 885930] PRK10188 Arm-DNA-bind_3 RVT-GII GIIM InsE PHA02517 Neighborhood of RT #2 [2382534, 2389118] Rve RVT_N RVT-GII Resolvase Recombinase Zn_ribbon_recom RVT-GII GIIM COG3547 COG3547 Neighborhood of RT #3 [2438638, 2445059] RVT_N RVT-GII Resolvase Recombinase Zn_ribbon_recom RVT-GII COG3547 COG3547 Rve Feature: gene Location: 881809-882522 bp Feature: domain Description: PRK10188 Location: 881818-882514 bp Feature: domain Description: PRK10188 Location: 881818-882514 bp Feature: gene Location: 882825-883298 bp Feature: domain Description: Arm-DNA-bind_3 Location: 882834-883092 bp Feature: domain Description: Arm-DNA-bind_3 Location: 88283 4-883 092 bp Feature: gene Location: 883933-884859 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 884137-884440 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 88413 7-884440 bp Feature: domain Description: GIIM Note: maturase Location: 884491-884701 bp Feature: domain Description: GIIM Note: maturase Location: 884491-884701 bp Feature: gene Location: 884792-885043 bp Feature: domain Description: InsE Location: 884801-885032 bp Feature: domain Description: InsE Location: 884801-88503 2 bp Feature: gene Location: 885040-885930 bp Feature: domain Description: PHA02517 Location: 885106-885925 bp Feature: domain Description: PHA02517 Location: 885106-885925 bp Feature: gene Location: 2382534-2382896 bp Feature: domain Description: Rve Location: 2382600-2382783 bp Feature: domain Description: Rve Location: 23 82600-23 82783 bp Feature: gene Location: 2383165-2383347 bp Feature: gene Location: 2383430-2384176 bp Feature: domain Description: RVT_N Location: 2383499-2383742 bp Feature: domain Description: RVT_N Location: 23 83 499-23 83 742 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2383787-2384165 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23 83 787-23 84165 bp Feature: gene Location: 2384307-2384492 bp Feature: gene Location: 2384489-2386213 bp Feature: domain Description: Resolvase Location: 2384510-2384948 bp Feature: domain Description: Resolvase Location: 23 84510-23 84948 bp Feature: domain Description: Recombinase Location: 2385044-2385407 bp Feature: domain Description: Recombinase Location: 23 85044-23 85407 bp Feature: domain Description: Zn_ribbon_recom Location: 2385452-2385656 bp Feature: domain Description: Zn_ribbon_recom Location: 23 85452-23 85656 bp Feature: gene Location: 2386194-2386952 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2386197-2386446 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23 86197-23 86446 bp Feature: domain Description: GIIM Note: maturase Location: 2386497-2386731 bp Feature: domain Description: GIIM Note: maturase Location: 23 86497-23 8673 1 bp Feature: gene Location: 2387251-2388597 bp Feature: domain Description: COG3547 Location: 2387305-2387704 bp Feature: domain Description: COG3 547 Location: 23 873 05-23 87704 bp Feature: domain Description: COG3547 Location: 2388022-2388439 bp Feature: domain Description: COG3 547 Location: 23 88022-23 8843 9 bp Feature: gene Location: 2388822-2389118 bp Feature: gene Location: 2438638-2438805 bp Feature: gene Location: 2439176-2439358 bp Feature: gene Location: 2439441-2440187 bp Feature: domain Description: RVT_N Location: 2439510-2439753 bp Feature: domain Description: RVT_N Location: 243 9510-243 9753 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2439798-2440176 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 243 9798-2440176 bp Feature: gene Location: 2440318-2440503 bp Feature: gene Location: 2440500-2442224 bp Feature: domain Description: Resolvase Location: 2440521-2440959 bp Feature: domain Description: Resolvase Location: 2440521-2440959 bp Feature: domain Description: Recombinase Location: 2441055-2441418 bp Feature: domain Description: Recombinase Location: 2441055-2441418 bp Feature: domain Description: Zn_ribbon_recom Location: 2441463-2441667 bp Feature: domain Description: Zn_ribbon_recom Location: 2441463 -2441667 bp Feature: gene Location: 2442205-2442792 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2442208-2442457 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2442208-2442457 bp Feature: gene Location: 2443263-2444609 bp Feature: domain Description: COG3547 Location: 2443317-2443716 bp Feature: domain Description: COG3 547 Location: 2443 3 17-2443 716 bp Feature: domain Description: COG3547 Location: 2444034-2444451 bp Feature: domain Description: COG3 547 Location: 244403 4-2444451 bp Feature: gene Location: 2444682-2445059 bp Feature: domain Description: Rve Location: 2444751-2445036 bp Feature: domain Description: Rve Location: 2444751-244503 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10188 (transcriptional regulator SdiA), Arm-DNA-bind_3 (pfam13356), RVT-GII, GIIM (pfam08388), InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), Rve (COG3316), RVT_N (pfam13655), Resolvase (smart00857), Recombinase (pfam07508)
Zn_ribbon_recom (pfam13408), COG3547 (Transposase )

Seq: RDRT01000004.1 (368643 bp)
Overview 1 RT 1: 293142-296679 bp Neighborhood of RT #1 [293142, 296681] HTH_1 PBP2_OccR GIIM RVT-GII Arabinose_bd AraC Feature: gene Location: 293142-294119 bp Feature: domain Description: HTH_1 Location: 293151-293325 bp Feature: domain Description: HTH_1 Location: 293151-293325 bp Feature: domain Description: PBP2_OccR Location: 293418-294006 bp Feature: domain Description: PBP2_OccR Location: 2934 18-294 006 bp Feature: gene Location: 294593-294850 bp Feature: domain Description: GIIM Note: maturase Location: 294599-294764 bp Feature: domain Description: GIIM Note: maturase Location: 294 599-294 764 bp Feature: gene Location: 294866-295117 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 294896-295010 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 294 896-295010 bp Feature: gene Location: 295253-295426 bp Feature: gene Location: 295671-296681 bp Feature: domain Description: Arabinose_bd Location: 295755-296304 bp Feature: domain Description: Arabinose_bd Location: 295755-296304 bp Feature: domain Description: AraC Location: 296388-296679 bp Feature: domain Description: AraC Location: 296388-296679 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_1 (pfam00126), PBP2_OccR (cd08457), GIIM (pfam08388), RVT-GII, Arabinose_bd (pfam12625), AraC (COG2207)

Seq: RDRT01000001.1 (5644993 bp)
Overview 1 RT 1: 324311-328730 bp 2 RT 2: 1315205-1319583 bp 3 RT 3: 1360386-1365383 bp 4 RT 4: 2229889-2232711 bp 5 RT 5: 2558344-2563624 bp 6 RT 6: 2630541-2637219 bp 7 RT 7: 3818503-3821636 bp Neighborhood of RT #1 [324311, 328768] HigB RVT-GII AcrR DltE Neighborhood of RT #2 [1315205, 1319663] Rve HTH_23 HTH_23 DDE_3 RVT-GII GIIM Rve DDE_Tnp_IS240 Neighborhood of RT #3 [1360386, 1365412] Resolvase Recombinase Zn_ribbon_recom RVT-GII GIIM COG3547 COG3547 Rve Neighborhood of RT #4 [2229889, 2232711] envZ RVT-GII Neighborhood of RT #5 [2558344, 2563624] TcpQ RVT-GII GIIM RVT-GII trehalose_OtsA Neighborhood of RT #6 [2630541, 2637290] Tnp_DNA_bind DDE_Tnp_1 Dimer_Tnp_Tn5 Tnp_DNA_bind DDE_Tnp_1 Dimer_Tnp_Tn5 RVT-GII Glyco_transf_90 DDE_Tnp_IS240 Neighborhood of RT #7 [3818503, 3821636] Histone_HNS Rve RVT_N RVT-GII GIIM Feature: gene Location: 324311-324628 bp Feature: domain Description: HigB Location: 324323-324608 bp Feature: domain Description: HigB Location: 324323-324608 bp Feature: gene Location: 325254-325526 bp Feature: gene Location: 325700-326692 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 325706-326336 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 325 706-326336 bp Feature: gene Location: 327145-327708 bp Feature: domain Description: AcrR Location: 327163-327637 bp Feature: domain Description: AcrR Location: 327163-327637 bp Feature: gene Location: 327941-328768 bp Feature: domain Description: DltE Location: 327974-328730 bp Feature: domain Description: DltE Location: 327974-328730 bp Feature: gene Location: 1315205-1315525 bp Feature: domain Description: Rve Location: 1315247-1315499 bp Feature: domain Description: Rve Location: 1315 247-1315 499 bp Feature: gene Location: 1316251-1317309 bp Feature: domain Description: HTH_23 Location: 1316335-1316467 bp Feature: domain Description: HTH_23 Location: 1316335 -1316467 bp Feature: domain Description: HTH_23 Location: 1316575-1316632 bp Feature: domain Description: HTH_23 Location: 13165 75 -1316632 bp Feature: domain Description: DDE_3 Location: 1316758-1317193 bp Feature: domain Description: DDE_3 Location: 131675 8-1317193 bp Feature: gene Location: 1317335-1318369 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1317350-1317986 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 131735 0-1317986 bp Feature: domain Description: GIIM Note: maturase Location: 1318067-1318286 bp Feature: domain Description: GIIM Note: maturase Location: 1318067-1318286 bp Feature: gene Location: 1318380-1318859 bp Feature: domain Description: Rve Location: 1318434-1318824 bp Feature: domain Description: Rve Location: 1318434-1318824 bp Feature: gene Location: 1319307-1319663 bp Feature: domain Description: DDE_Tnp_IS240 Location: 1319310-1319583 bp Feature: domain Description: DDE_Tnp_IS240 Location: 1319310-13195 83 bp Feature: gene Location: 1360386-1362110 bp Feature: domain Description: Resolvase Location: 1360407-1360845 bp Feature: domain Description: Resolvase Location: 1360407-1360845 bp Feature: domain Description: Recombinase Location: 1360941-1361304 bp Feature: domain Description: Recombinase Location: 1360941-1361304 bp Feature: domain Description: Zn_ribbon_recom Location: 1361349-1361553 bp Feature: domain Description: Zn_ribbon_recom Location: 1361349-13615 5 3 bp Feature: gene Location: 1362107-1362292 bp Feature: gene Location: 1362463-1363221 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1362466-1362715 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1362466-1362715 bp Feature: domain Description: GIIM Note: maturase Location: 1362766-1363000 bp Feature: domain Description: GIIM Note: maturase Location: 1362766-1363000 bp Feature: gene Location: 1363520-1364866 bp Feature: domain Description: COG3547 Location: 1363574-1363973 bp Feature: domain Description: COG35 47 Location: 13635 74-1363973 bp Feature: domain Description: COG3547 Location: 1364288-1364708 bp Feature: domain Description: COG35 47 Location: 1364288-1364708 bp Feature: gene Location: 1364939-1365412 bp Feature: domain Description: Rve Location: 1364966-1365383 bp Feature: domain Description: Rve Location: 1364966-1365 383 bp Feature: gene Location: 2229889-2230071 bp Feature: gene Location: 2230052-2231398 bp Feature: domain Description: envZ Location: 2230445-2231381 bp Feature: domain Description: envZ Location: 2230445 -2231381 bp Feature: gene Location: 2231532-2231759 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2231550-2231703 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22315 5 0-2231703 bp Feature: gene Location: 2232196-2232372 bp Feature: gene Location: 2232439-2232711 bp Feature: gene Location: 2558344-2559312 bp Feature: domain Description: TcpQ Location: 2559064-2559298 bp Feature: domain Description: TcpQ Location: 25 5 9064-25 5 9298 bp Feature: gene Location: 2560513-2560677 bp Feature: gene Location: 2560892-2561299 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2560931-2561042 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25 60931-25 61042 bp Feature: domain Description: GIIM Note: maturase Location: 2561117-2561294 bp Feature: domain Description: GIIM Note: maturase Location: 25 61117-25 61294 bp Feature: gene Location: 2561334-2561624 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2561349-2561586 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25 61349-25 615 86 bp Feature: gene Location: 2561852-2562079 bp Feature: domain Description: trehalose_OtsA Location: 2561855-2562074 bp Feature: domain Description: trehalose_OtsA Location: 25 6185 5 -25 62074 bp Feature: gene Location: 2562707-2563624 bp Feature: gene Location: 2630541-2631719 bp Feature: domain Description: Tnp_DNA_bind Location: 2630562-2630733 bp Feature: domain Description: Tnp_DNA_bind Location: 26305 62-2630733 bp Feature: domain Description: DDE_Tnp_1 Location: 2631441-2631576 bp Feature: domain Description: DDE_Tnp_1 Location: 2631441-26315 76 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 2631582-2631675 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 26315 82-2631675 bp Feature: gene Location: 2631898-2633253 bp Feature: domain Description: Tnp_DNA_bind Location: 2631904-2632030 bp Feature: domain Description: Tnp_DNA_bind Location: 2631904-2632030 bp Feature: domain Description: DDE_Tnp_1 Location: 2632657-2632960 bp Feature: domain Description: DDE_Tnp_1 Location: 263265 7-2632960 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 2632963-2633245 bp Feature: domain Description: Dimer_Tnp_Tn5 Location: 2632963-2633245 bp Feature: gene Location: 2633366-2634691 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2633636-2634323 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2633636-2634323 bp Feature: gene Location: 2635396-2636238 bp Feature: domain Description: Glyco_transf_90 Location: 2635726-2636182 bp Feature: domain Description: Glyco_transf_90 Location: 2635 726-2636182 bp Feature: gene Location: 2636952-2637290 bp Feature: domain Description: DDE_Tnp_IS240 Location: 2636964-2637219 bp Feature: domain Description: DDE_Tnp_IS240 Location: 2636964-2637219 bp Feature: gene Location: 3818503-3818796 bp Feature: domain Description: Histone_HNS Location: 3818521-3818761 bp Feature: domain Description: Histone_HNS Location: 38185 21-3818761 bp Feature: gene Location: 3818947-3819291 bp Feature: domain Description: Rve Location: 3818956-3819262 bp Feature: domain Description: Rve Location: 381895 6-3819262 bp Feature: gene Location: 3819368-3820873 bp Feature: domain Description: RVT_N Location: 3819437-3819680 bp Feature: domain Description: RVT_N Location: 3819437-3819680 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3819725-3820367 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3819725 -3820367 bp Feature: domain Description: GIIM Note: maturase Location: 3820418-3820652 bp Feature: domain Description: GIIM Note: maturase Location: 3820418-382065 2 bp Feature: gene Location: 3820889-3821161 bp Feature: gene Location: 3821406-3821636 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HigB (COG4680), RVT-GII, AcrR (COG1309), DltE (COG3967), Rve (COG3316), HTH_23 (pfam13384), DDE_3 (pfam13358), GIIM (pfam08388), DDE_Tnp_IS240 (pfam13610), Resolvase (smart00857)
Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), COG3547 (Transposase ), envZ (PRK09467), TcpQ (pfam10671), trehalose_OtsA (TIGR02400), Tnp_DNA_bind (pfam14706), DDE_Tnp_1 (pfam01609), Dimer_Tnp_Tn5 (pfam02281), Glyco_transf_90 (pfam05686)
Histone_HNS (pfam00816), RVT_N (pfam13655)