myRT

myRT report for GCA_003696465.1_ASM369646v1

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Seq: RFHG01000420.1 (2287 bp)
Overview 1 RT 1: 355-2178 bp Neighborhood of RT #1 [355, 2201] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 355-519 bp Feature: gene Location: 546-2201 bp Feature: domain Description: RVT_N Location: 603-840 bp Feature: domain Description: RVT_N Location: 603-840 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 888-1509 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 888-1 509 bp Feature: domain Description: GIIM Note: maturase Location: 1566-1794 bp Feature: domain Description: GIIM Note: maturase Location: 1 566-1 794 bp Feature: domain Description: HNHc Note: nucleases Location: 2022-2178 bp Feature: domain Description: HNHc Note: nucleases Location: 2022-21 78 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: RFHG01000430.1 (1079 bp)
Overview 1 RT 1: 1-740 bp Neighborhood of RT #1 [1, 740] RVT-GII Feature: gene Location: 1-459 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 304-457 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 304-457 bp Feature: gene Location: 558-740 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: RFHG01000158.1 (3316 bp)
Overview 1 RT 1: 1-3314 bp Neighborhood of RT #1 [1, 3313] CRISPR_Cas6 RVT-CRISPR Cas_Cas1 Feature: gene Location: 1-741 bp Feature: gene Location: 788-3313 bp Feature: domain Description: CRISPR_Cas6 Location: 1403-1571 bp Feature: domain Description: CRISPR_Cas6 Location: 1403 -1571 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 1838-2429 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 183 8-2429 bp Feature: domain Description: Cas_Cas1 Location: 2651-3314 bp Feature: domain Description: Cas_Cas1 Location: 2651-3 3 14 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CRISPR_Cas6 (pfam10040), RVT-CRISPR, Cas_Cas1 (pfam01867)

Seq: RFHG01000105.1 (1056 bp)
Overview 1 RT 1: 1-844 bp Neighborhood of RT #1 [1, 1011] RVT-GII GIIM Feature: gene Location: 1-1011 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-565 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 -565 bp Feature: domain Description: GIIM Note: maturase Location: 613-844 bp Feature: domain Description: GIIM Note: maturase Location: 613-84 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)