myRT

myRT report for GCA_003697805.1_ASM369780v1

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Seq: RBBX01000117.1 (3818 bp)
Overview 1 RT 1: 2-3796 bp Neighborhood of RT #1 [2, 3816] Rve HsdM RVT-AbiP2 Tra8 Feature: gene Location: 2-244 bp Feature: domain Description: Rve Location: 23-215 bp Feature: domain Description: Rve Location: 23-21 5 bp Feature: gene Location: 267-1745 bp Feature: domain Description: HsdM Location: 288-1713 bp Feature: domain Description: HsdM Location: 288-1 71 3 bp Feature: gene Location: 2083-3471 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2344-2809 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2344-2809 bp Feature: gene Location: 3535-3816 bp Feature: domain Description: Tra8 Location: 3538-3796 bp Feature: domain Description: Tra8 Location: 3538-3796 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rve (COG3316), HsdM (COG0286), RVT-AbiP2, Tra8 (COG2826)

Seq: RBBX01000029.1 (34979 bp)
Overview 1 RT 1: 2-5613 bp Neighborhood of RT #1 [2, 5684] Transposase_mut AAA_10 RVT-GII AAA_10 TcpE Feature: gene Location: 2-190 bp Feature: domain Description: Transposase_mut Location: 5-191 bp Feature: domain Description: Transposase_mut Location: 5-191 bp Feature: gene Location: 283-1101 bp Feature: domain Description: AAA_10 Location: 289-1087 bp Feature: domain Description: AAA_10 Location: 2 89-1087 bp Feature: gene Location: 1235-3061 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1535-2234 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1535-2 2 34 bp Feature: gene Location: 3758-5308 bp Feature: domain Description: AAA_10 Location: 5087-5270 bp Feature: domain Description: AAA_10 Location: 5087-52 70 bp Feature: gene Location: 5295-5684 bp Feature: domain Description: TcpE Location: 5313-5613 bp Feature: domain Description: TcpE Location: 5313-5613 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Transposase_mut (pfam00872), AAA_10 (pfam12846), RVT-GII, TcpE (pfam12648)

Seq: RBBX01000007.1 (111668 bp)
Overview 1 RT 1: 99632-105172 bp Neighborhood of RT #1 [99632, 105198] RelB_DinJ FtsK_SpoIIIE RVT-GII HNHc FtsK Dcm Feature: gene Location: 99632-99976 bp Feature: domain Description: RelB_DinJ Location: 99842-99968 bp Feature: domain Description: RelB_DinJ Location: 99842-99968 bp Feature: gene Location: 100045-101061 bp Feature: domain Description: FtsK_SpoIIIE Location: 100702-100942 bp Feature: domain Description: FtsK_SpoIIIE Location: 100702-100942 bp Feature: gene Location: 101655-103529 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102021-102717 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102021-102717 bp Feature: domain Description: HNHc Note: nucleases Location: 103257-103416 bp Feature: domain Description: HNHc Note: nucleases Location: 103 257-103 416 bp Feature: gene Location: 103631-104011 bp Feature: domain Description: FtsK Location: 103646-103886 bp Feature: domain Description: FtsK Location: 103 646-103 886 bp Feature: gene Location: 104056-105198 bp Feature: domain Description: Dcm Location: 104059-105172 bp Feature: domain Description: Dcm Location: 104059-105172 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RelB_DinJ (TIGR02384), FtsK_SpoIIIE (pfam01580), RVT-GII, HNHc (smart00507), FtsK (COG1674), Dcm (COG0270)