myRT

myRT report for GCA_003698325.1_ASM369832v1

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Seq: MCNB01000002.1 (536706 bp)
Overview 1 RT 1: 26053-34225 bp Neighborhood of RT #1 [26053, 34419] DUF262 YeeA RVT-UG5 AAA_21 AAA_21 Feature: gene Location: 26053-27924 bp Feature: domain Description: DUF262 Location: 26101-26869 bp Feature: domain Description: DUF262 Location: 261 01 -26869 bp Feature: gene Location: 27928-29709 bp Feature: domain Description: YeeA Location: 28795-29575 bp Feature: domain Description: YeeA Location: 28795-29575 bp Feature: gene Location: 29706-32726 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 30201-30672 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 30201 -30672 bp Feature: gene Location: 32723-33175 bp Feature: gene Location: 33280-34419 bp Feature: domain Description: AAA_21 Location: 33352-33421 bp Feature: domain Description: AAA_21 Location: 33352-33421 bp Feature: domain Description: AAA_21 Location: 33895-34225 bp Feature: domain Description: AAA_21 Location: 33895-34225 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF262 (pfam03235), YeeA (COG1002), RVT-UG5, AAA_21 (pfam13304)

Seq: MCNB01000004.1 (425292 bp)
Overview 1 RT 1: 49831-58672 bp 2 RT 2: 74936-85606 bp Neighborhood of RT #1 [49831, 58680] NTP_transferase_like_1 COG3178 RVT_N RVT-GII YkfC HNH LptD PRK10770 Neighborhood of RT #2 [74936, 85671] PRK05658 PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 RVT_N RVT-GII GIIM HNH COG3177 NERD Feature: gene Location: 49831-50505 bp Feature: domain Description: NTP_transferase_like_1 Location: 49837-50476 bp Feature: domain Description: NTP_transferase_like_1 Location: 49837-50476 bp Feature: gene Location: 50502-51518 bp Feature: domain Description: COG3178 Location: 50505-51504 bp Feature: domain Description: COG3178 Location: 50505-51504 bp Feature: gene Location: 52791-54503 bp Feature: domain Description: RVT_N Location: 52848-53091 bp Feature: domain Description: RVT_N Location: 52 848-53091 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53136-53772 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 53136-53772 bp Feature: domain Description: YkfC Location: 53982-54132 bp Feature: domain Description: YkfC Location: 53982 -54132 bp Feature: domain Description: HNH Note: nucleases Location: 54309-54447 bp Feature: domain Description: HNH Note: nucleases Location: 54309-54447 bp Feature: gene Location: 54636-57407 bp Feature: domain Description: LptD Location: 54831-57393 bp Feature: domain Description: LptD Location: 54831-57393 bp Feature: gene Location: 57466-58680 bp Feature: domain Description: PRK10770 Location: 57478-58672 bp Feature: domain Description: PRK10770 Location: 57478-58672 bp Feature: gene Location: 74936-76789 bp Feature: domain Description: PRK05658 Location: 74948-76787 bp Feature: domain Description: PRK05658 Location: 74948-76787 bp Feature: gene Location: 76896-80633 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 77004-77661 bp Feature: domain Description: PBP2 _BvgS_HisK_like Location: 77004-77661 bp Feature: domain Description: PRK09776 Location: 77874-78345 bp Feature: domain Description: PRK09776 Location: 77874-78345 bp Feature: domain Description: PAS Location: 78402-78927 bp Feature: domain Description: PAS Location: 78402 -7892 7 bp Feature: domain Description: PRK10060 Location: 78939-80583 bp Feature: domain Description: PRK10060 Location: 78939-80583 bp Feature: gene Location: 81714-83399 bp Feature: domain Description: RVT_N Location: 81771-82011 bp Feature: domain Description: RVT_N Location: 81771-82 011 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 82059-82695 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 82 059-82 695 bp Feature: domain Description: GIIM Note: maturase Location: 82749-82980 bp Feature: domain Description: GIIM Note: maturase Location: 82 749-82 980 bp Feature: domain Description: HNH Note: nucleases Location: 83232-83370 bp Feature: domain Description: HNH Note: nucleases Location: 832 32 -83370 bp Feature: gene Location: 84122-85243 bp Feature: domain Description: COG3177 Location: 84140-85232 bp Feature: domain Description: COG3177 Location: 84140-852 32 bp Feature: gene Location: 85456-85671 bp Feature: domain Description: NERD Location: 85483-85606 bp Feature: domain Description: NERD Location: 85483-85606 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NTP_transferase_like_1 (cd06422), COG3178 (Predicted phosphotransferase, aminoglycoside/choline kinase (APH/ChoK) family ), RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844), LptD (COG1452), PRK10770 (peptidyl-prolyl cis-trans isomerase SurA; Provisional), PRK05658 (RNA polymerase sigma factor RpoD; Validated), PBP2_BvgS_HisK_like (cd01007)
PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), GIIM (pfam08388), COG3177 (Fic family protein ), NERD (pfam08378)

Seq: MCNB01000008.1 (260085 bp)
Overview 1 RT 1: 254256-259786 bp Neighborhood of RT #1 [254256, 260082] CHD CHD RVT-GII GIIM DUF772 Feature: gene Location: 254256-255800 bp Feature: domain Description: CHD Location: 254472-254886 bp Feature: domain Description: CHD Location: 254472-254886 bp Feature: domain Description: CHD Location: 255114-255603 bp Feature: domain Description: CHD Location: 255114-255603 bp Feature: gene Location: 256884-257063 bp Feature: gene Location: 257795-259201 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 258146-258803 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 258146-258803 bp Feature: domain Description: GIIM Note: maturase Location: 258881-259103 bp Feature: domain Description: GIIM Note: maturase Location: 258881-259103 bp Feature: gene Location: 259453-260082 bp Feature: domain Description: DUF772 Location: 259591-259786 bp Feature: domain Description: DUF772 Location: 259591-259786 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CHD (cd07302), RVT-GII, GIIM (pfam08388), DUF772 (pfam05598)